Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U564608 in the current build, Tomato 200607 #2

Unigene SGN-U318789

Unigene Basic Information

Unigene ID:	SGN-U318789
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318789
mRNA sequence:	Length: 1750 bp

>SGN-U318789 Tomato 200607 #1 (13 members)
GAGAGCGTTTTGCATACAAAAAAAAATTAATTAACATGGATACCATCGATCTTTTTCTCTATCTTTTTCTCTCTGTTTTCACCTTTTATC
TCCTCCGGTGTATGGCGGCGGCCCATCTTCGCGGGCGTAAAACTCGACTCCCGCCGGGAACCCTTGGCCTCCCGTTTATCGGAGAAACCC
TCCAGTTAATTTCTGCGTACAAAACGGAAAATCCTGAACCGTTCATCGATGACCGTGTTTCAAAATACGGCAGCATTTTCACGACCCATG
TTTTTGGTGAACCGACGGTTTTCTCTGCTGACCCGGAAACGAACCGGTTTATTTTGCAGAATGAAGGTCGGCTTTTTGAGTCGAGTTATC
CCGGTTCGATACAGAATTTACTTGGGAGATACTCTCTGTTGCTTATGAGAGGAAGTCTACACAAACGAATGCATTCATTAACTATGAGTT
TTGCTAATTCTTCCATTCTTAAAGATCATCTGTTGGGCGATATAGATCGATTGGTTAGGCTTAATTTGGATTCATGGACCGGCAGGGTTT
TCCTCATGGACGAGGCTAAGAAGATAACGTTTAATCTAACAGTGAAGCAGTTGATGAGTTTTGATCCATGTGAGTGGACAGAGAATCTGA
TGAAAGAGTATATGCTTGTTATTGAAGGTTTCTTCTGCATTCCTTTGCCTATTTTCTCATCCACCTATCGCAAGGCCATTCAAGCGAGAA
CGAAAGTAGCGGAGGCGTTGGGATTGGTAGTGAGAGATCGGAGAAAAGAACGAGACGGAGGAGAACGAAAGAATGATATGTTGGAGGCAT
TGTTCGAAGGAGACGGAGTTGAAGGAGTAGGATTTTCCGATGAGGAAATTGTTGATTTTATACTGGCGTTGCTTGTTGCTGGCTATGAAA
CTACCTCCACCATCATGACCCTTGCTGTAAAATTCCTCACGGAGACACCCCGTGCTCTATCACTACTTAAGGAAGAGCACGAGGAGATCA
GGTTAAGAAAAGGTGAAGTTAAGTCTTTACAATGGGAAGATTACAAGTCAATGCCCTTCACTCAATGCGTTGTTAATGAAACTCTGCGAA
TCGCTAACATAATTAGTGGAGTGTTCAGGAGAGCCATGACTGACATAAATATCAAAGGTTATACCATTCCAAAAGGTTGGAAGGTTTTTG
CTTCTCTCCGAGCTGTTCATCTAGACCATGAACATTTCAAAGATGCGCGTACATTTGATCCATGGAGGTGGCAGAGTAGTGCAGGACCGA
CAAGCTCACCTAACGTATTCACACCATTTGGTGGTGGACCTCGTCGATGTCCTGGTTACGAGCTTGCTAGAGTGGAACTCTCTGTTTTCC
TTCACCACTTGGTGACTCGTTTTAGTTGGGTTCCGGCTGAGGCAGATAAGTTAGTTTTCTTCCCAACGACAAGGATGCTGAAGCGATATC
CAATTAACGTCCAACATCGAAGCTTGTTTGAGCAGAAAGAAGAAGAGAAGGGTTCGTGAGATTGTAGAATGCAGAGTGGAGGGAGGTGTA
TGAAAGGTGTTAAATAAGACAATAGTATATAGGTGTTAGCATATACTTAGAAAATTAAATTATTTGTAGTGAATTGAGCAGAGATTAACA
TTCCTCTGATCTGCAAGGGGAATCAGGAAGATTTTATTCTGAGCAATTGGTTATTATATAATAGTAATGCACAGTTTTTAATGTATGTTA
ATTAGCATGATTAAAGATTTAATTGCCCTCAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	2
Solanum lycopersicum	vSlycmRNA		8362	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (13)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101365	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	908
2	118484	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	90
5	129903	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	14

Preceding Unigenes (2)

Unigene	Build
SGN-U221699	Lycopersicon Combined #3
SGN-U221868	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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