Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U584588 and SGN-U584590 in the current build, Tomato 200607 #2

Unigene SGN-U318820

Unigene Basic Information

Unigene ID:	SGN-U318820
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318820
mRNA sequence:	Length: 2640 bp

>SGN-U318820 Tomato 200607 #1 (14 members)
CCTTCGACTGGAGCACGAGGACACTGACATGGACTGAAGGAGTAGAAAGCGTGTGCGTAAAAAGAAGCTTCTTCCCGTCTCTTCCATCTC
CGATTACTAGTCGATAGCTTTACTGTTACGAAACCCTGTTTTTGCAGAGCTGTTTTGGAGTTGAGATATTTCAAATTTTGGACTCTTAAT
TGCTGCTATTTTGCTTCCAATCAAAGAAAAGAAAAGTTGCAGACGAAGGAAGAGAGAGAAGTAAAAGACATTAATACATGAAACCAGTCC
ACGAAGCAGATGATTGTTCACTTTAATTCAATTTCGAGTCATGGGTTTTCATCACATCATTATTATTAGATTCGTTTTCTCAATTTTATT
GGGTTGGTTATCATCGTCAGTTGAGGCTACTAATTCAACTAAGTGCAATCAGTACTGTGGAGCTGCTGGTTCTTATAGTCCGCGTGTTTC
GTATCCATTTGGATTCTCAGAGGGTTGTGGGATTCGTTTAGACTGTACTGAAAGTACTGGAGAAATCAGAATTGGGGAATATATAATACA
GAATGTGACTTCAGAGACTCTGATGGTTAACTTCTCGATGAATTGCAGCCGTCCGATTGAGGATCTACAGCAATTTGATCGAACCAACTT
TGGTATGACTTGGAGAAATGGACTGCTTCTACACAATTGCAAAGTACCGAAGAGCGAATGTACCATACCATCGGAAATTTTAAGCACGCG
TTTGAACATACAGTCATGTGATTCGAAGAAGGAGAATGTCAGTTGTTATTCTGAGGCGAGGGCGGATTATTTAGATTACCAGAAATTGAA
GAATACAGGGTGTGGAACTGTGATTTCGTCCATCTTGATTGGTATGGATAATGATACAATGAAGAGTTCTGCCATGTTTATCGAGTTTCA
GACGATGGAATTAGCGTGGGGATTGGAAGGGGATTGTGCATGTCATAACGATGCAAATTGTACCAACGTTTCTCTCCCGGGGAACCGAAA
AGGTTTCCGGTGCCGGTGTAAAGATGGATTCGTCGGTGATGGCTTCAGCGACGGTGATGGCTGCCGGAAAGTTTCAAGATGTAATCCTTC
CAGATACCTCTCTGGACGATGTGGTGGAACTACCAGAATTGGTGTGCTCGTTGGAGGGATTATTGCTGGAGCTGGTTTAATGGCTGCTTT
GGCTGTTCTTTGCTACTGCATTCGAAGACGTTCTGCATCTCTCAAGAAAAGAATGAGCGCAAGACGCCTTCTCTCTGAAGCTGCAGGCAG
CAACAGTGTTCATGTATTTCAATACAAAGAAATTGAGAGAGCAACAAATAGTTTCTCTGAGAAACAGAGGCTGGGCATAGGGGCTTATGG
CACAGTTTATGCTGGAAAGCTCCACAGTGATGAATGGGTTGCAATTAAGAAACTAAGACACCGGGATCCGGATGGTGTTGAACAAGTGAT
GAATGAGGTTAAGCTTTTGTCTTCTGTAAGTCATCCAAACTTAGTCCGCCTCTTGGGTTGTTGTATAGAAAATGGTGAACAGATTCTTGT
TTATGAATTTATGCCCAACGGAACTCTAGCTCAGCATCTACAGAGAGAAAGGAGTTCAGGACTTCCGTGGACAATACGTCTCACTATCGC
AACAGAAACTGCTCATGCGATTGCTCACCTTCACTCAGCAATGAATCCACCAATATACCACAGGGATATCAAATCAAGTAACATACTATT
GGATTACAACTTCAACTCAAAAGTTGCAGACTTTGGTCTTTCCAGATTTGGCATGACAGATGATTCCCACATTTCTACAGCACCACAAGG
TACTCCAGGTTATGTGGATCCTCAGTACCATCAGAATTACCATCTTTCCGATAAGAGTGATGTGTACAGCTTCGGGGTGGTTCTTGTAGA
AATCATTACAGCAATGAAAGTGGTGATTTCTCTAGATCACACAGTGAGATTAATTTGGCTGCACTTGCAATAGACAGAATAGGTAAGGGT
CGTGTGGATGAGATCATCGATCCATTTCTAGAGCCACACAGAGATGCATGGACTCTATCATCAGTTCATAGAGTTGCAGAGCTTGCTTTT
AGATGCCTTGCATTTCATAGGGATATGAGGCCTTCAATGACAGAAGTGGCAGACGAGCTGGAACAGATCAGGCTCAGCAGTTGGGCATCA
TTGGAGGACAATGTATGCATGACTTCATCAGTGAATTCCTCTTGCTCATCTCCCCGTAGTATGAGTGAGACATCTTTTCGTAGTACAACA
ACTAAGAAAGGAGTAGGGAGTAGGAGGTTGATTGTTCCCCAGAAGATAGCGAATTCACTGGCAATCATGGAGGAAATAAAAGACAGTTCC
CCTGTTTCTGTACAGGATCCTTGGTTAAGTGAAGAGAGTCCCCCTTCAACAAATCGATTATTAGGTAATTCTGGTCGATGATGACTTGAA
AAAAGAAGTTCGCTCTAGGTAGAAAACTGAGGGGGATCACCTGTAATCTATCACCTCCTTTTCCTGCCTTCTAATCTACTGAGAATATCA
AAGAGTATTATTAGAGCACTTCTCTTTGTATCAAAATTTTTATTGCTTCATACGCAGAATATAGAATGTGAAATAGTATTTGCAATGCCC
TGGCCAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AY535423	WAK-like kinase	kinase

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	5
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	5
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (14)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 2 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128958	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	116

Preceding Unigenes (1)

Unigene	Build
SGN-U217211	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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