Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U582641 and SGN-U582642 in the current build, Tomato 200607 #2

Unigene SGN-U318822

Unigene Basic Information

Unigene ID:	SGN-U318822
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318822
mRNA sequence:	Length: 1550 bp

>SGN-U318822 Tomato 200607 #1 (15 members)
ATTTTATTACTCCAATCTCTTCAAGTCTATTTCCCATTATACCAACTACTACATCCCCAACCAATTGAGATTTCTCGCCGGTGAACTACC
ACGCCGAATTTGCATTGACTTCTCTTCGTCTCCGGCACTGTTTTTACGAGAATCCATGGGTACTTCCGACGTTAATGCTAACTCCTCCTC
CTCTTCCCTCGTCAAAGATTTCCTCCACAAATGCGGTGGCGTTGCCGTGATTGACGGCGGATTTGCGACGGAGCTGGAGCGTCATGGAGC
CGACCTTAATGACCCTCTTTGGAGCGCTAAATGTCTCCTCACTGACCCTCACCTTGTCCGCGCTGTACACTTGGATTACCTTGAAGCTGG
TGCAGATATAATACTCAGTTCATCTTATCAGGCAACCATCCAGGGGTTTAAGGCCAAAGGATATTCTATAGAAGAAAGTGAATCCTTACT
CAAAAGAAGTGTTGAGATTGCATGTGAAGCACGTGATGTCTACTATAAAAGATGCCGTGAATCTTCCTCTGATCAAAGCACTGATGGGAA
GGTTCTCAAACAACGCCCTATCTTAGTTGCAGCATCTGTTGGGAGTTATGGGGCCTATTTAGCTGACGGTTCAGAATACAGTGGGGAATA
TGGGGATGCGGTTGATCTCAAGTTTCTAAAGGATTTTCATCGTAGAAGGGTTCATCTTCTTGCAAACTCTGGTGCTGATCTAATAGCTTT
TGAGACCGTGCCAAATAAACTGGAAGCTCAGGCTTTTGTCGAGCTTCTTAAGGAAGAAGACATAAAGACTCCTGCCTGGTTATCCTTCAA
CTCCAAAGACGGTGTAAATGTGGTCAGTGGTGATTCCTTGTCAGAATGTGCTGCAATTGGCGAATCATGTGAAAAAGTTTTGGCTGTTGG
AATCAACTGTACTCCTCCTAGATTTATTCTGGATCTTATTTTATCCATCAAGCAGGTAACAACAAAACCAATCCTTATATATCCCAACAG
TGGAGAGAGTTACGATGGCATTCGCAAGGAGTGGGTGAGTAATACCGGGGTGACAGATGAAGATTTTGTTCCTTATGTTAATAAATGGTG
CGAGGCAGGAGCATCCCTGGTAGGAGGTTGCTGCAGAACTACTCCAAATACCATTAGAGCAATATACAAATCACTCTCTGGAAAACGCAC
TGTCTAATCTGGAGAACAAAATAGGGGCATCTAACTTGAAAATTGAGACAAGATTTTGTGCCTGGGTCGAAAGGATTGTTTCAGTCTCTT
GTAAACCTGGATGGCCTACATTTCAGAGAGGTGTCTGCTTGACTGGAGTTCAGGGCAAGAGAAGATCCACCTGATCAACCTAGGCTGTTT
GTTGGTGGTGTATCATATTTTTGGTACGTGAAGATGTTCGAAGAATCTATGAAATTTTGGTTTTTGAGAACTTTTTAGTATTACGCCACA
TTGTAGTTTGTGGTTGCTAAATGGATGTACAATTCACTCTATTTTAACACCAAACGTGGAACCGTAGCTATTTAAGTAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTSC	seed	2256	1

mRNA member sequences (15)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (4)

Annotations (manual: 3 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	102817	Homocysteine S-methyltransferase - Molecular Function: homocysteine S-methyltransferase activity (GO:0008898)	10
2	120208	Homocysteine S-methyltransferase - Molecular Function: homocysteine S-methyltransferase activity (GO:0008898)	10
5	130493	Homocysteine S-methyltransferase - Molecular Function: homocysteine S-methyltransferase activity (GO:0008898)	10

Preceding Unigenes (1)

Unigene	Build
SGN-U216836	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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