Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U565102 and SGN-U587914 in the current build, Tomato 200607 #2

Unigene SGN-U318905

Unigene Basic Information

Unigene ID:	SGN-U318905
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318905
mRNA sequence:	Length: 1379 bp

>SGN-U318905 Tomato 200607 #1 (12 members)
GAGGAAATAAATAAATATATACATCACATTTTTTTCTCCAATTTTTTTGTTTTTCCATTCTATAATGGCTGGAATGTGTTGTGGAGTTAA
TATAGCCGAAACTGAGGCTACTACACCAGTTGAGCCTAGTTCAGAATCTGCGAGGAGAAGAAGAATGGAAATTCATCAATTCCGTTTTGT
ACCTACCGATGTTGCAGCTGCAACACAGGAAAAAAATGGACGGAAAAGGCATAAGATTGACAAAGTTATTGATAATAACAAGAGGCAGAA
ATTGGAAAGCAGTGTAACGATTTCGTTGGCGGTAACTGATGAAAGGAATGAAAATGAAGTGTTGGATCTGTCTGAATCTGGTTCTCAATC
TGTTGAAATTGAGCCTGATTTACCCAAATATGGGATGACTTCTGTATGTGGAAGAAGAAGAGATATGGAAGATGCGGTTTCGATTCATCC
TTTGTTTTGCAAAGAGAATAGTGAAAACTCAAGCAATTTACATTTCTTCGGTGTTTATGATGGCCATGGCTGTTCTCATGTGGCGATGAA
GTGTAAAGATCGAATGCACGAGATAGTGAAAAATGAGGTGGAGAAGGAAGAAACTCAATGGAAAGAAGCAATGATTCAGAGCTTTTCGTT
AATGGATAAAGAAGTTGTTAATTATTCTACTAGCGTACTTCCATCTTCTACCTCAGGTTCCAATTGTAGATGCGAGCTTCAAACTCCACA
GTGCGATGCCGTTGGATCAACTGCCGTCGTTGCCGTTGTAACTCCGGACAAAATCATCGTTTCCAATTGCGGTGATTCTCGTGCCGTCCT
CTGTAGAAACGGCGTCGCTATTCCTCTTTCCGTTGATCATAAGCCGGATCGACCTGATGAATTGAATAGAATACAAGAAGCTGGTGGCCG
TGTTATATATTGGGACGGAGCTAGAGTTCTCGGCGTTTTAGCAATGTCTCGAGCCATTGGTGACAATTATTTGAAACCATATGTTATATC
TGAACCGGAGGTCACTATAACAGATCGAACCAACGAAGATGAGTGTTTGATATTAGCCAGTGATGGATTATGGGACGTGGTATCGAACGA
GACCGCGTGTGGCGTGGCACGTATGTGTTTGCAATCGAGACGGCCACCGTCTCCGGCGGGATCGCCGGGAAATGATATTACGGTGACCGG
CGCCGGAGAAAGCTCGGACAAGGCGTGTTCAGATGCATCAATTCTATTGACGAAATTAGCCTTGGCTAGGCATAGTAGTGATAATGTTAG
TGTTGTTGTGGTGGATTTGAAAAAAATCTATTACAGTATGGGTGCTTAATTAGTACTAGTTTTATTCATAAATTATTAATTAAGTGGTAA
ATTAAGGGGGAAACTCTATTTTTAGTTTT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	LA	Leaf Mature leaves	6589	3
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (12)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 2 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101395	Protein phosphatase 2C-like - Molecular Function: catalytic activity (GO:0003824)	322
2	118451	Protein phosphatase 2C-like - Molecular Function: catalytic activity (GO:0003824)	125
5	129633	Protein phosphatase 2C-like - Molecular Function: catalytic activity (GO:0003824)	17

Preceding Unigenes (2)

Unigene	Build
SGN-U223724	Lycopersicon Combined #3
SGN-U227034	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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