Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U576466 in the current build, Tomato 200607 #2

Unigene SGN-U318909

Unigene Basic Information

Unigene ID:	SGN-U318909
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318909
mRNA sequence:	Length: 1928 bp

>SGN-U318909 Tomato 200607 #1 (3 members)
TTGAACTCAACCTTCGCTTGTTGAACAAAAGTCAAGAGTTCAATTCTTGATTTTTTTCTAATAGAAATGGCATCAACTTCTCTTTCTCTT
CCTTCTCTTAAGCTACAATTCCCCTCGCATACATCATCATCTTCTCGTAAAAATTCATCGTCTTATCGTGTTAGTATTCGTCCCATTCAG
GCTTCGGTGTCTGAGATACCACCTTACATTTCATCACCATCACAATCACCATCGTCATCGGCATCACCACCTGTTAAACAAGCGAAACTC
CCAGCCCGAAAAGTCCCTGGAGATTATGGACTACCATTAGTTGGTCCATGGAAAGACAGACTTGATTACTTCTACAATCAGGGCAAAAAT
GAATTCTTCAAATCAAGAATTCAGAAGCATCAGTCTACTGTTTTTCGAACGAACATGCCACCAGGTCCATTCATTTCATTCAATCCAAAC
GTTGTTGTTTTGCTAGATGGTAAAAGTTTCCCCGTACTTTTTGATGTATCTAAAGTTGAAAAAAAGGATCTTTTCACTGGTACTTTCATG
CCATCCACTGATCTCACAGGCGGTTATCGAGTTCTATCCTATCTTGATCCTTCTGAACCAAACCATGCCAAATTGAAGAAACTCATGTTT
TATCTCCTTTCATCACGACGCAATGAAGTTATTCCAGAGTTTCACAATAGCTACTCCGAGCTATTTGAAACTCTGGAAAACGAACTCTCC
ACGAAAGGTAAAGCTGGGCTCAATGCAGCAAATGATCAAGCTGCAGTTAACTTCCTGGCTAGGTCTTTATATGGCATTAATCCTCAAGAC
ACCGAACTTGGAACCGATGGACCTAAGTTGATCGGAAAATGGGTGCTGTTCCAGCTTCATCCTTTGCTAATTCTCGGCCTCCCAAAGGTT
CTTGAAGACCTTGTTATGCATACTTTCAGACTTCCCCCTGCCTTGGTGAAAAAAGATTACCAGAGATTGTACAATTTCTTCTACGAAAAC
TCAACTTCAGTTCTTGATGAAGCAGAAAAAATTGGTATTTCTCGGGAAGAAGCTTGTCATAATTTGCTATTCGCGACATGTTTCAATTCA
TTCGGAGGAATCAAAATCTTTTTCCCGAATATGTTGAAATGGATAGGCAGAGCAGGGGCTAAACTCCACAGTCAATTAGCACAAGAAATT
CGTTCAGTCATTTCATCAAACAGTGGGAAGGTCACAATGGCTGCCATGGAAAAAATGCCACTAATGAAATCAGTAGTCTACGAATCCCTC
AGAATTGAACCTCCGGTAGCATCACAATACGGCAGAGCAAAACACGACATGGTAATTGAATCCCATGACGCATCGTTCGAAATCAAAGAA
GGTGAACTCCTTTATGGGTTTCAACCGTTTGCAACTAAAGACCCAAAAATCTTCGATCGATCGGAAGAATTCGTCGCCGATCGGTTCATC
GGAGAAGAAGGGGAGAAGCTGTTGAAACACGTGTTATGGTCAAATGGGTCGGAAACAGAGAACCCATCGATAAATAACAAACAGTGTGCC
GGAAAAGACTTCGTCGTACTGGTTTCAAGATTGTTGTTGGTCGAATTGTTCCTCCGATATGATTCGTTTGAGATTGAAGTCGGTGCATCT
CCATTAGGAGCTGCAATTACCTTAACTTCTCTGAGAAGAGCCAGTTTTTGATGAACACTGGCTTAATTAAGTAATTAGTAATCTTGTTTA
GTGTATTATATTTCATTGTTGTGTTACTAAGAAATAATTAATTTACAGAACAGAGCATGCCGGCCGGCGGCGGTAATTGAGGAAGAGGCC
GGTGATGTGTATAGTTTAGTATAGTAATTATTTTTTGTTGGAAAATGGAATGTGTAACTATGTTAATGATCAATGTAATATGTTGTTCTC
AATAAATACAACAGTTAATTCACCCCTCAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
aos	allene oxide synthase	allene oxide synthase

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101962	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037) E-class P450 group IV - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	27
2	118907	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037) E-class P450 group IV - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	26
5	129313	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037) E-class P450 group IV - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	26

Preceding Unigenes (2)

Unigene	Build
SGN-U217795	Lycopersicon Combined #3
SGN-U241102	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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