Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U568599, SGN-U568601, and SGN-U593978 in the current build, Tomato 200607 #2

Unigene SGN-U318999

Unigene Basic Information

Unigene ID:	SGN-U318999
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	318999
mRNA sequence:	Length: 1594 bp

>SGN-U318999 Tomato 200607 #1 (13 members)
GAGATTAGGGAAGAAGATGAAAGCATAAAATCTTATATGAACTACAAGGAGAATTCAGTTTCTGCTCTAAATGCTGGTAAATCATCCTTA
AAACAAGATATCATTTCCAGTGAGCACGGAAGTGTTGGTGAAGTGACATTAGCTGAATGCCAGAGAAAGAAGGGAGAAGACTTGGAATGT
AATAAGCTGGATTCGGACCATCAGGAGGAAGGTGGACTGAAGAAGAATTCATCAAAAACAGAGCTGCCACCCCTTACCTCAGACAAAGAG
GCAGTGCAAGCCAAAAGTAAATGCCAAACAGCAAAAACTTGTCGAAGTCAGAGTGGACCACTTATGCCAGGTGTTGAGCTAAGTCATTCG
GCATCAGAAAGATCTGCCAACTTCGAAAGAAGTAAGATTGAAAACCAACAAGCAGAAAAAGCTCATCAAGTACGAAGGGCGCCCAGCTTT
AGTGGACCTCTAATGCTTCCAAATCGAGCTTCAGCAAATAGTAAATCAGCCCCAATTAACTCATCTGGGGGATTCAAAGATTCATCAGAA
GACAAGTCCACGGCCAACTTGGTTCAAATAAAAGGGAGGTTTTCTGTGACATCAGAAAATGTAGATCTTGTAAAGGGGTCACAGTTGAGG
AAGACTGCTAGTGTTGGAGACTGGATAATGGAATCTAAACTGATGCCTCCCAGTCGAATACCAAAAGAGCTTGGCCTTGATAATATTCCT
GCCTCAGTTCTGATGCCTCACCTACAAAATCTTTTTCAACAGACATCAATCCAACAGGATCTAATTGTGAATCTGCTGAGTAGCTTGCAA
CCACCTGAGGCAGGAGATGCTCCGCAATATGGAAAGTCATCTTCACAGTGTGTTGCAGAGAATAATGGAAGTGTTGATGCAGCTGTTTCT
GAAAGGGAGCGCATGCTGCTGGTCAAAATATCTGAGCTTCAAGCTAGGATGAGTAGCTTGACGGATGAATTAACTACTGAAAAGCTTAAA
TACATGCAGTTGCAACAGCGGCTAAATTCCATGTCAAATCAGGGGGAAGATTGGGACAGGAGAGAATCTGAATCTTGAAGCTGAAAGATC
TTCGTGAAGTATTAACAATGTGTATATTCAGATTATAAGTTATATAGAACGGAGCAGAGTTCACTATCCGTGTGGCTGGAAAAATTCATC
GATGAATAGAAGCTCAACGTGTAATAATCCAGCTCCAACTGATGAATAAAGAAGATCATCAGTTTGTAGAGAATTTCTTCATTTATTTGG
TGAGTTCGAGCTGAAAACAATCCTTCTGTGCTGTCCATGTCTCCAGTCCCTGAAGTTTAATTTTTATTTATGCTGGATGCACAGACGGGT
TCCTCGCTCTTGATTGGCCTCCCCTAAGGTGGGGGCCGAGCTGCTGAGGGTTCTGGGGCGAAATCTACTTTGTTCTGGCCTAATTTATTT
TTTTATTTTGTAATTTGAATGCACCATTAAGCTGTAATTTTGTTCATATGTATACCTAATAACACCAACAGATACTTATAGTAGTCCCAT
TAAAAATCGTTTATGGGAGTATCCAAGCCATATTTTTGACCTTGTAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	3
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	2

mRNA member sequences (13)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (4)

Annotations (manual: 2 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118993	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	23
5	129719	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	16

Preceding Unigenes (1)

Unigene	Build
SGN-U217316	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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