Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U567499 in the current build, Tomato 200607 #2

Unigene SGN-U319218

Unigene Basic Information

Unigene ID:	SGN-U319218
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	319218
mRNA sequence:	Length: 1187 bp

>SGN-U319218 Tomato 200607 #1 (14 members)
TTCGTATCAATAGGAATGATTTTTGTTTGAATTCAGACATCGGCGGCGAGTAAAGAGAAATGGAGAAAGAGGGAAAAAGCGATGCCGGTA
ATCGTACTATCACAGTGAATGTTAGGTTCAGCGGTCGATCGATACCGGTGGAAATCTCCGACGAGTCCACTGTCAAACACCTCAAGTCTC
TCCTTCAACCACTCACAAATGTCCTCTCTCGCGGCCAAAAACTCATCTTCAAAGGGAAAGTTTTGGTGGATGAAGTGACATTGAAGTCAT
CGGAGGTCGGAAATGGTGCGAAGATCATGCTTATGGCTTCCCAGGGCTTACATCAAGGGGATGGACCAATAAGAAAGGAAGCTTCCAACT
TTCCCACAGCGAGGAGGATGCCTGAAGCTATGAGACCTAAAAGGGATGTTCCTCAAGTTCCTGTTGTGAAGAGCCAACTTGAACGGTGGA
AGGCCACCGGGGTTGTTGCATTATCAGAATGCAATCTGAAGGTCCTGCCTGATGAAGTGTTGAACTGCGGACCTTCCGCTAGAGTCCTTG
ATCTCAGCCACAACGCCATACAGCATCTTCCAGCCACAATTAATAGCTTGAGTTCTCTTCAGAAATTGATACTCAATGGGAATGAAATTA
TGGATAATTCCTTAAGCTGGGAAGAGCTAGCTTCTCTAAAGAGTCTAATGGTTATTTCACTGAACCAAAACCACATAGCAACACTGCCTC
CTGAGGTCGGCACTTTAACCAGTCTGAAACAACTTCATATTGCACATAACGAGTTAACAGGTCTCCCATCTGAGATAGGTCTGCTGACCA
GCCTTGAGGTTCTGAAAGTTAACAACAACAGGATACACTCTATTCCGGAAAGTATAGGGGATTGTGTTTCTCTTATTGAGGTTGATCTTT
CATCTAATCTTTTGGTAGAGCTGCCAGAAACAATTAGCAAAATAAAGGACTTAAAGGCACTTTATCTTAGGAACAACGGGCTCAAATCCC
TTCCTAGCAGCATTTTTAAACAGTGCTGTCAACTCTCTACACTAGATCTCCATGGAACTGAAATAACTATAGATGTTATCAGCCAGATTG
AAGGATGGGAGAACTTTGATGAGAGAAGACGCTCGAAGCATCAGAAACAACTGGACTTCAGAGTGAGCAGCTCTGGCAAATTTGACGAAG
GAGCTGATCAAAGCTGA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	7
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	2

mRNA member sequences (14)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	120244	Leucine-rich repeat Leucine-rich repeat typical subtype	10
5	132515	Leucine-rich repeat Leucine-rich repeat typical subtype Ubiquitin - Biological Process: protein modification (GO:0006464) Pentatricopeptide repeat	5

Preceding Unigenes (1)

Unigene	Build
SGN-U217155	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
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