Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U584419 in the current build, Tomato 200607 #2

Unigene SGN-U319276

Unigene Basic Information

Unigene ID:	SGN-U319276
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	319276
mRNA sequence:	Length: 1565 bp

>SGN-U319276 Tomato 200607 #1 (14 members)
TTTGATCTCTTCCGCCGGCTGACTTTTTAAAGTAGTTTAGTTGATTATCAACTCACTATTTATTCATTTTTTCAACATCGATTCCCCAAA
ATCACAATTTTAATCTCCTCCGCCGTGGAACGCCACTTTTTCTCATTTCCCGGCTGCCGGACCACCGGGAAACTGAAATTCTTCTCCGAT
GTATCTCACAGTTTTTACGATTTTGCTATTTCTTCCCGTAACGTTCCTTTTCAAGTTCATATACTCAGTGATTTACCTTCCATTGAAGTT
CGAAAAACACTTCAGGAAGCAAGGAATCAGAGGTCCCGGCTACCGTTTGATCTACGGAAACACAGAGGAAATCAAACAGAAGATTAGTGA
AGCTGAATCGAAATCAATTCCGTTCAATCACAACATACTGCATCGAATTGCTCCTCATTACTACAACTGGTCCGCCGTTTACGGCAAGAC
TTTTTTGTGGTGGTTCGGGTCGAAGCCCCGATTGGCTATTTCTGACCCGGATATAATTAAAGGGCTTTTCATAAATAAAGCAGTGGATAA
AGTTGAATTTGATCCACAAACTAAGCAGTTGTTTGGACAAGGCGTTGTTGGTTTGCGAGGTGAACAATGGGCTTTACATAGGAAGATTGC
AAACCAGGCTTTTAACATGGAGGTTGTTAAGGCTTGGGTACCGGATATTGTGACTAGTGTTATCAAGGCATTGAAGAAATGGGAAAAGGA
AAATGAAGAGAAGGAAGAATTTGAAATAGATGTCTTCAAAGAATTGAATGATCTCTCAGCTGAGGTTATATCTAGAACAGCTTTTGGGAG
TAGCTTTGAAGAGGGGAAACGCATATTTGAGTTGCAAGAGCAACAAATATCTCTTACTTTGCAGGCAATACGAAGCGTCTACCTTCCTGG
ATTTAGCATTGCATCAAGAGTGGCAAGATAAAGCTCGAGAAGAAGTTTTCCGAGTTTGTAAGGGTAACAACCTTCCAAGTGCAGAGAATC
TGAATGATTTCAAGATTGTGACAATGATACTCAATGAGACATTGAGACTCTACCCACCGGTAGTCGCATTGACAAGAGGAACTTCTAAAG
ACATCAAGTTGGGAGACCTTGAAATTCCTGCGAATACTCAATTTTATGTGGCACTAGCTGCTGTGCATCATGACACTGGGATATGGGGGA
AAGATGCACTGGAATTCAACCCTCAGAGATTTGTCGAGTCTCGTAAGCATTTGGCTTCATTTTTCCCTTTTGCATTAGGTCCAAGAGTTT
GTGTTGGGCAAAACTTAGCCATGGTTGAAGCCAAAATCATCCTGGCAATGATAGTTAAGAATTTCTCCCTTGCATTATCACCTTCATATG
TTCATGCTCCAACCATGCGTCTTACTATGCAGCCCCAGTATGGTGCTCCTGTCCTCTTTAGGAAGATTTAAGTTTAAATGTAGCTACTCG
TCACTGAGTGATGAGTTTGTCCATTGACGATATATCTTAGCTTCAATTATGAACAAGTTTGGATCGATTATATGAATCATTCATTCTGCT
CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	3
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	4
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (14)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101365	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	908
2	118455	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	121
5	128959	Cytochrome P450 - Molecular Function: monooxygenase activity (GO:0004497) - Molecular Function: iron ion binding (GO:0005506) - Biological Process: electron transport (GO:0006118) - Molecular Function: heme binding (GO:0020037)	116

Preceding Unigenes (2)

Unigene	Build
SGN-U219370	Lycopersicon Combined #3
SGN-U224242	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer