Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U572525 in the current build, Tomato 200607 #2

Unigene SGN-U319333

Unigene Basic Information

Unigene ID:	SGN-U319333
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	319333
mRNA sequence:	Length: 1233 bp

>SGN-U319333 Tomato 200607 #1 (14 members)
CCCTACTCAGATTGGCCAGACCGGTCAAGGAGATGGAGTTGTTGCGAGAGCTAATAGTGTGGAGACCGTATCAAGTTGGCCGAATTGGCC
ACTCGAAAGTGGTAGTGAAGATGAAGTAGGTGGAAGTGGTAACACATTTGGTAATTAATGAGATCCGGTTGTCAGGTCTTTAAGCAGTGT
TAAGGTACTGTATAGTTGTTGTTACTACTAATTAGGAACATCCAAGAGAATAATTTTGCCATAGATCTGCTGGAGAATTGTAAATCATGA
TGCATAATCACGCTTCTGCCAATAATCAAACAAGCAAGTGTTAAAATCCTGTAATTTTTGTTATGGCAATTTCATGTGTTGCTTGTCGTA
ATAGTAGTCTATTGTGATTGATACCCGTACAAGCAATAATAACATTCTCTAATTTTGGTTGAAAAAAAAAAAAAAAAAAAACTCGAAACT
AGTTCTCTCCGCCGTTACTCGCCGTTAACTGACGGCGGCGGAGTAACGCTAGAGCTCACCACGACCACCAATTCGCCGCTAGCAATCGAC
GTGACGGAATCGACGGAGATGAGAATCCGGCGACTGATCACCGAGAATCCCGTCGTTATTTTCACCCGATCCGGCTGCTGCATGTGCCAC
GTCATGAAACGGCTGTTATTATCCGCCGTTAGCGTTCACCCAACCGTTATTCAACTGGAAGAAGAAGAGATCGCCGCCCTCCCTGCCGGC
GCCGGAGACGGCGCGGAGGACGGCGGTGAGATGCCGGCTATGTACATCGGAGGGACACGTGTCGGTGGATTCGAAAGCCTCGTGGCACTT
CACCTTAGTGGTGGCCTTGTTCCTAAGCTTGTGGAAGTTGGTGCGATTACTGAAATGGTATTGTAAAGAATTTTAATTATGTTTCTATAT
TTGTAATTATGTGTTTTAATCAAAATTAAAAAATAATAATTTTAGTATATTAGTATTAATTAAGTTTTAAGGTATTGTTTAGTCTTCATA
ATTGTGCTTTTACAGGCTGTAATCTCTCTATTTTATTCCAAATGACCAAAAAGTTGAATAAAAAAGAAGAGGATGTGCTCCTTTTATATA
TATATATATATATTGGGAATTTGGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANANNTCCCGGCCCAAAGGGCCCCT
TTGGAATTTTTTTGGGGGCCCCAAAAATGTGGGGGGAAAACAGGGGAAAAAGTTGTTCCGGGG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	3
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2

mRNA member sequences (14)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (6)

Annotations (manual: 0 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101384	Thioredoxin-like fold	404
2	121858	Glutaredoxin - Molecular Function: electron transporter activity (GO:0005489) - Biological Process: electron transport (GO:0006118) - Biological Process: cell redox homeostasis (GO:0045454) Thioredoxin fold Thioredoxin-like fold Glutaredoxin-like plant II	6
5	132855	Glutaredoxin - Molecular Function: electron transporter activity (GO:0005489) - Biological Process: electron transport (GO:0006118) - Biological Process: cell redox homeostasis (GO:0045454) Thioredoxin fold Thioredoxin-like fold Glutaredoxin-like plant II	5

Preceding Unigenes (1)

Unigene	Build
SGN-U218028	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
End Date:
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