Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U568026 in the current build, Tomato 200607 #2

Unigene SGN-U319460

Unigene Basic Information

Unigene ID:	SGN-U319460
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	319460
mRNA sequence:	Length: 1606 bp

>SGN-U319460 Tomato 200607 #1 (13 members)
TCAGGGCTGAGAGTCTAAACCAGCAGGAATTGATTGAACAGCTTCCCAAGACAATTTGCAAAAGCATAAGGCACCATTTGTTTTTACCAA
CAGTGGAGAAAGTTTATCTTTTTAAAGGTGTCACAAAGGAAATTCTGTTACTTTTGGTTGCAGATATGAAGGCTGAGTACATACCTCCAA
GAGAGGATGTAATAATGCAGAACGAATCACCAGACGAGTTGTACATCATAGTGTCAGGGGAGGTGGAAATGATTGAATCTGAAATGGAGA
ATGAGCCAACTGTTTGGACTTTCAAATCTGGAGATATGATAGGAGAAGTAGGGGCATTGTGTTGTAGACCTCAGAGCTACACGTATCGAA
CCAAAACACTTTCACAGCTCTTGAAGATAAGAACTAGTAATTTGATTGAAGCAATGAAAACCAGACAAGAAGATAATATCATCATGATCA
AGAACTTCCTTCAGCATCATAAGAAGCTCAAAGGCTTAAGGCTTGGAGATTTACTTCATGGAGTGGGGGGAGATTATGGTGATCCAAACA
TGTATGTTAACTTGCTAACTGTTGCTAGTACAGGTAATGCTACTTTCCTTGAAGAACTTCTCAAGGCTAAATTAGATCCTGATATCGGAG
ACGCTCAAGGAAGAACTCCACTGCACATTGCAGCATCGAAAGGGCATGAAGAGTGTGTCATGGTGCTTCTTAGACATGGATGCAACATAA
ATCTCCGAGATGTAAATGGTCACACCGCGTTGTGGGAAGCTATAGCAGCAAAACACCATTCAACATTTCACGTGTTGTACCATTGGGCTT
CCGTCTCCGATCCCTACATTGCTGGTGACCTCTTATGCACAGCAGCTAGAAAAAATGACTTAACAGTGATGAAAGAACTCCTAAAACATG
GATTACAAGTTGACTCGAAGGACCGCGATGGATCAACTGCTATTCATGTTGCACTGGAAGAAAATCTTGAAGACATGGTAAAGCTACTTC
TAATGAATGGAGCTGAGATAAACGATAAGTTAAAGTACAAGCTTTCTTCAATGAACCTAAATGACATGCTACAAAAGCGCGAAGTAGGAC
ACAGAATTATGGTATCCGACACAATGGATGAAGTTGCTCAAAAATGGCGCCAACAAGAGAAGCAACACAATTCAGAAAGCACTAGGGATC
AAATGTCTTTTAGAGTTAGCATATACAGAGGCCATCCTGTTATCAGGAGAAGAACTCATTGCAGTGAACCTGGCAAATTAATTACGCTTC
CAAATTCACTTGCAGAGCTCAAGATCATTGCAGGTCAGAAATTTGGATTTGATGCAACAAATGCATCGATTACGGATCAAGAAGGATCAG
AAATTGACTCAATTGAAGTAATAAGAGATAATGACAAGCTATTTATAGTTGAAGGTCCAAACTGCTTGTAGCAATACCTATTAGTGACAC
TTAAAAGTGTCTGTTAAGATGCATATATCACTAAAGAACTCAGAAGAAAAATGTATAGTGGACATACATTTCTTTCCTATTTGTGTGGCA
TATTGAGAACCTATTGCAGTGATATATACTCAAACTTTTGCCTGAAAAAAAAAAAAAAAAAACTGACTAGTCTCTC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	5
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1

mRNA member sequences (13)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (3)

Annotations (manual: 1 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101379	Ankyrin	460
2	118883	Ion transport - Molecular Function: ion channel activity (GO:0005216) - Biological Process: ion transport (GO:0006811) - Cellular Component: membrane (GO:0016020) K+ channel pore region - Molecular Function: potassium channel activity (GO:0005267) - Biological Process: potassium ion transport (GO:0006813) - Cellular Component: membrane (GO:0016020) Cyclic nucleotide-binding EAG/ELK/ERG potassium channel - Molecular Function: voltage-gated potassium channel activity (GO:0005249) - Biological Process: potassium ion transport (GO:0006813) - Cellular Component: membrane (GO:0016020)	27
5	129420	Ion transport - Molecular Function: ion channel activity (GO:0005216) - Biological Process: ion transport (GO:0006811) - Cellular Component: membrane (GO:0016020) K+ channel pore region - Molecular Function: potassium channel activity (GO:0005267) - Biological Process: potassium ion transport (GO:0006813) - Cellular Component: membrane (GO:0016020) Cyclic nucleotide-binding EAG/ELK/ERG potassium channel - Molecular Function: voltage-gated potassium channel activity (GO:0005249) - Biological Process: potassium ion transport (GO:0006813) - Cellular Component: membrane (GO:0016020)	22

Preceding Unigenes (1)

Unigene	Build
SGN-U217439	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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