Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U585167 in the current build, Tomato 200607 #2

Unigene SGN-U319623

Unigene Basic Information

Unigene ID:	SGN-U319623
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	319623
mRNA sequence:	Length: 1215 bp

>SGN-U319623 Tomato 200607 #1 (8 members)
GCCTCGGATTCAATAGCATTAGCTTATCTATTATCTTTTTAATTACATCAAGAGAAACTACATTAGTTTTGTGTTTTTGTTCTAATAAAG
TTTAGTGATAATCATATATATATAGAGAGAGAGAGAAAGTAGTTGCTTGTTAAATATATTTTGTTGGAGTTGTTTGCTTCTTTGTGTATG
TATAAGGATTTGGTTGAACATGCTTAAAGTTGGGATGAATGAAATGCTTGATGTTAATGGAACAAATTTGGAGTTGGAGTATGTGGAAGT
GGATTCATCTAAACGCTATGGACGTTACAAAGAGATCCTTGGGAAAGGAGCAACCAAGATAGTATACAGAGCATTTGATGAGTTACTAGG
AATGGAAGTAGCTTGGAACCAAGTGAAACTCAATGACATGTTTAGGTCACCTGAAGAATTACAAAGGCTCTACTCAGAAGTCCATCTCCT
CAAAGAACTTGATCATGAAGCCATCATGAAATTCCATGCATCTTGGATCAATGTTGAAGGCAGAACCTTCAACTTCATTACTGAAATGTT
TACCTCTGGCACCCTTAGAGAGTATAGACACAAATACAAGCGATTAAACATACACGCAATTAAGAATTGGGGATGTCAAATCCTTAATGG
TCTTGCTTATTTGCATTGTCATGATCCTCCAGTTATACATCGAGATCTCAAGTGCGACAACATCTTTGTAAATGGACATCTTGGCCAAGT
CAAAATTGGTGATTTAGGATTAGCAACCATACTTTGTGGATCACACCATGCTCATAGTGTCATAGGTACTCCTGAGTTTATGGCACCAGA
ACTATATGAAGAGGATTATGATGAACTCGTTGACGTATACTCTTTTGGCATGTGTGTGTTAGAAATGCTCACTTCCGAGTATCCGTATAG
TGAATGTTCAAATCCAGCTCAAATATACAAGAAAGTCACCTCAGGAAAGCTACCAAAAGCGTTTTACAAGATAAATGATCCAGAAGCCCA
AAGATTTGTTGGAAGATGTTTGAGTCCTGTTTCTGAAAGGCCATCTGCTTCTGAGCTATTAAGGGATCCATTCCTTGCTGTTGATGAACA
TGAAGATTTACCTCCAGCCATAAATTTGTCATGTCAAAAGTATATGCCAAACGAAAAACAGAATGAAATTATACCTTTTCAGCCTGATGA
TTCAGTACTAGATGGTACAAACATGACAATCACCGGAACAATGAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LC	Leaf Mature leaves	5712	3
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118682	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	36
5	129220	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	30

Preceding Unigenes (2)

Unigene	Build
SGN-U218443	Lycopersicon Combined #3
SGN-U218444	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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