Sol Genomics Network

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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U565325 in the current build, Tomato 200607 #2

Unigene SGN-U320207

Unigene Basic Information

Unigene ID:	SGN-U320207
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	320207
mRNA sequence:	Length: 1552 bp

>SGN-U320207 Tomato 200607 #1 (11 members)
GTTAGCGCTAGTAATTGATGGGAAGGTGTTAATGTATGCCTTAGACCCTAATCTTCGTGTAATGTTGTTGAACTTGAGCTTGAATTGCAG
TGCAGTGGTTTGCTGTCGTGTTTCTCCTTTACAGAAAGCTCAGGTAACCAGCTTGGTTAGGAAGGGGGCTCAGAGAATTACACTTAGTAT
CGGTGATGGTGCTAATGACGTGAGTATGATTCAAGCTGCTCATGTTGGTGTTGGAATAAGTGGACAGGAGGGAATGCAAGCAGTGATGTC
TAGTGATTTTGCAATAGCTCAGTTCCGCTTTCTCACTGATTTATTGCTTGTCCATGGACGCTGGTCATATCTTAGAATATGCAAGGTGGT
GACATATTTCTTTTACAAGAATCTGATGTTTACACTCACTCAGTTTTGGTTTACCTTCCGCACTGGATTCTCTGGTCAAAGGTTCTATGA
TGATTGGTTCCAGTCTCTCTACAATGTGATCTTCACAGCGCTTCCTGTTATTATTCTTGGGCTTTTTGAGAAGGATGTCAGTGCATCTCT
CTCGAAGAAATATCCTGAGTTATACAAAGAAGGAATTAGAAATACATTCTTCAAATGGAGAGTTGTGGCTACCTGGGCTTTTTTTGCAGT
ATATCAATCATTAATCTTGTATAATTTTGTAATCCATTCGAGTACGAAGGGCATGAATTCATCTGGCAAGATGTTTGGCCTATGGGATGT
CAGTACAATGGCCTACACCTGTGTTGTTGTAACTGTCAATTTACGTCTCCTTATGATGTGCAACACAATTACAAGATGGCATCACATTAG
CGTTGGAGGGAGCATATTATTATGGTTCATTTTTGTATTTATCTACTCGGGTATCCACTTGCACAAAGAACAGGAGGGTATCTATTTAGT
CATCATTGTTCTGATAAGCACATTATACTTCTACCTTGCGCTGCTTCTCGTACCAGTTGCTGCACTTTTTGTTGACTTCCTATATCAGGG
GGTACAAAGATGGTTTTCCCCATATGATTACCAGATTGTTCAGGAAATTCACAAGCACGAAATCGACAACAGCAGGATTGGTTTATTAGA
GATCCGTAACGAGCTTTCTCCAGATGAAGAAAGGAGATACGCCATAATGCAACTTCCTGGACAGAGATCAAAACATACTGGTTTTGCTTT
TGATTCACCCGGTTATGAGTCATTTTTCGCATCTCAGGCTGGCGTGTTGGCACCTCAGAAGGCGTGGGACGTTGCTCGGAGAGCAAGCAT
GATGAAATCACGACCAAAGGTACCTAAAAAGAGCTGAGTTCCCTAAAATTTTGTACAAATTTTCTTCTTTAACCTTTCTTCTCTCCTATA
CAGCTTTTAACAGCTACGTAGAATTATTTCACTCTCATTCTTCGTACCGTTTCGAGTTAATTCTACAGTTACATACATATATATATATAT
AGTCTCTAGTTGTGTTTAGTGAGATTGTAGTAAAAATAACTGAGAAGAAAACAATAATGTACATTATTTAATGTAACCATCCCATACACA
CTTGCCAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	7
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (7)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101433	ATPase P-type K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter - Molecular Function: ATP binding (GO:0005524) - Biological Process: cation transport (GO:0006812) - Molecular Function: ATPase activity coupled to transmembrane movement of ions phosphorylative mechanism (GO:0015662) - Cellular Component: membrane (GO:0016020)	173
2	118823	ATPase P-type K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter - Molecular Function: ATP binding (GO:0005524) - Biological Process: cation transport (GO:0006812) - Molecular Function: ATPase activity coupled to transmembrane movement of ions phosphorylative mechanism (GO:0015662) - Cellular Component: membrane (GO:0016020) Phospholipid-translocating P-type ATPase flippase - Biological Process: cation transport (GO:0006812) - Cellular Component: integral to membrane (GO:0016021) - Molecular Function: ATPase activity (GO:0016887)	28
5	129301	ATPase P-type K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter - Molecular Function: ATP binding (GO:0005524) - Biological Process: cation transport (GO:0006812) - Molecular Function: ATPase activity coupled to transmembrane movement of ions phosphorylative mechanism (GO:0015662) - Cellular Component: membrane (GO:0016020) Phospholipid-translocating P-type ATPase flippase - Biological Process: cation transport (GO:0006812) - Cellular Component: integral to membrane (GO:0016021) - Molecular Function: ATPase activity (GO:0016887)	26

Preceding Unigenes (2)

Unigene	Build
SGN-U218533	Lycopersicon Combined #3
SGN-U218534	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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