Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U586079 in the current build, Tomato 200607 #2

Unigene SGN-U320308

Unigene Basic Information

Unigene ID:	SGN-U320308
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	320308
mRNA sequence:	Length: 1773 bp

>SGN-U320308 Tomato 200607 #1 (11 members)
AGAGAGAATTATATTATTAATAATTAAATAAACAGAAGATATTTTCATTACTTTGCCGACCATACATAAAATATCTTTCCCCAAAAACTT
CATTACCGGAAAAAAGGTCAAAAAGTACGAAAAAACCCACCGCCTTTATCCTCCATTTCTTCACATATACCTTCTTATCTGAGGCTAAAA
TTGACTTATCACTACTCGGTTCTTTGTGTTGGTTGGTCAACCGGTAGTATTCAGCTCCGATCACCAGTTCCGGTAACTGGTAACCATTGG
TGAGAAAGCTTTGGGATGTAAATCGAGCTTAGTTTGAGCTGAATCTGAGGTAGCAGACGAAATGGATCGAGGTCCGGGACCGTGTATGGA
TATGCCGATCATGCACGATAGTGACCGGTACGATTTTGTTAGAGATATCGGGTCGGGTAACTTTGGCGTTGCGAGGTTGATGACAGATAA
GCAGACTAAAGAGCTAGTTGCTGTCAAGTACATCGAAAGAGGCGATAAGATAGATGAAAACGTTCAGCGGGAGATAATCAATCACAGGTC
GCTGAGGCATCCTAACATAATTAGGTTCAAAGAGGTGATTCTGACGCCAACTCATCTCGCTATTGTGATGGAGTATGCATCTGGTGGGGA
GCTTTTTGAGAGAATCTCTAATGCGGGGCGCTTCAATGAGGATGAGGCTCGCTTCTTCTTCCAGCAACTTATATCTGGTGTCAGCTACTG
TCACTCCATGCAAGTATGTCATCGGGACTTGAAGCTGGAAAATACGTTGCTTGATGGAAGCCCTGCTCCTCGGCTAAAAATTTGTGATTT
TGGGTATTCCAAGTCTGCTCTGCTGCATTCACAGCCAAAATCAACTGTGGGAACACCTGCATATATTGCACCAGAAGTTTTGTTGAGGAA
AGAATACGATGGCAAGATTGCAGATGTCTGGTCGTGTGGAGTGACATTGTATGTCATGTTAGTGGGTGCTTACCCTTTTGAGGATCCTGA
TGAACCAAAAGATTTTCGGAAGACGATCAATAGGATCCTGAGCGTGCAGTATTCTGTTCCTGAGAACATTCAGATATCTGAGGAATGTCG
CCACTTAATCTCAAGGATCTTTGTTGGAGATCCGGCACAGAGGATCACAATGCCTGAAATCAGGAATCATGTATGGTTTTTGAAGAATCT
TCCAGCGGACTTAATAGACGATAGGATGATTAGTGATCAGTTTGAAGAACCCGATCAACCAATGCAGAGCATTGATACGATCATGCAAAT
AATCTCAGAGGCAACAGTACCACCAATTGGCTTGTATAACTTGGAAATGATGGACGATGACATGGATGACTTGGATTCAGAGCCTGATCT
TGATATTGATAGCAGCGGGGAGATCATATATGCAATGTGAGTGCATGCCAAGCTTGTGAAAAGGAAGGTGTATCCACAATCTTAGAACAT
TTCTGGACTTGTTGGTGTGCAAGGCTTAGAGATTGTTGAAGCTCAGTAACATGAAAATGGGGTATTTACAATGTTTGTAATTAGTCAAGT
TCTTATCCTGAAAGGGGCTTTTAGTCTGCCCATGAATTATTTCTTCTATTACCATAGGAGGAATTGGCTGAAAAAGTAATGGAGTTTCCA
TACTTGAGTTCATAATCTCTTTATAATGTCATACAGTGTTGTTCTTTTGTAACTCTGTACTTTCTTATATGCGTTTGTGTCAAAACAAAT
TATGTGCTCTTTCTGGTTTTTGTAAGTTAAGATGCTTAATAGTCCAAAAAACAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (10)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 3 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	128941	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	167

Preceding Unigenes (1)

Unigene	Build
SGN-U218536	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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