Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U585014 in the current build, Tomato 200607 #2

Unigene SGN-U320404

Unigene Basic Information

Unigene ID:	SGN-U320404
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	320404
mRNA sequence:	Length: 793 bp

>SGN-U320404 Tomato 200607 #1 (10 members)
CAGAGTGAAAAGAAAAAGGAGGAGTGGCCCATATTTTTGCATTTGCTCACACCGTCTCAATTCATCATTATTTTTAGTCGCTTCTCCTTT
GTCTCCTCCATTGTTCATCATCTCCTCTCTTCAGACAAATAGCTTGAAATTGATCATCTTCAGAAACTTTTAGCAATTTATATTCACTAA
GGACGATAACAGAGAATGGTCAAAAGATATGGAGCGTTTTGAAGCAGGAATTATACCATGTTGCAGTGCCTAGAGGGGATCAAGCATTTA
GGTGCCTCTCTGTCTAAATGTTGTGATCTGGACAGACAATCAACAGCCTTTGAAGATCCAGAGATCCTTGCACGGGAGACAGTTTTTAGC
GTCAGTGAGATTGAAGCTCTCTATGAGCTTTTTAAGAAGATTAGCAGTGCAGTGGTTGATGATGGGCTGATCAACAAGGAAGAATTTCAA
TTGGCGCTATTCAAGACGAACAAAAAGGAAAGTCTGTTTGCAGATAGGGTATTTGACTTATTTGACACAAAGCACAATGGAATCTTGGGT
TTTGAGGAGTTTGCTCGTGCCCTCTCTGTTTTCCATCCAAATGCTCCGATCGATGATAAGATTGAGTTTTCTTTTCAGCTATACGATCTC
AAGCAACAAGGCTTCATTGAGAGGCAAGAGGTGAAGCAAATGGTGGTTGCTACCCTTGCTGAATCTGGTATGAATCTGTCAGACGATGTT
ATTGAGAGCATAATCGATAAGACTTTTGAAGAAGCTGATACTAAACATGATGGAAAGATTGACAAGGAGGAAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	3
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118606	Recoverin - Molecular Function: calcium ion binding (GO:0005509) Calcium-binding EF-hand - Molecular Function: calcium ion binding (GO:0005509) EF-Hand type - Molecular Function: calcium ion binding (GO:0005509)	44
5	129091	Recoverin - Molecular Function: calcium ion binding (GO:0005509) Calcium-binding EF-hand - Molecular Function: calcium ion binding (GO:0005509) EF-Hand type - Molecular Function: calcium ion binding (GO:0005509)	43

Preceding Unigenes (1)

Unigene	Build
SGN-U219398	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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