Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U578157 in the current build, Tomato 200607 #2

Unigene SGN-U320506

Unigene Basic Information

Unigene ID:	SGN-U320506
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	320506
mRNA sequence:	Length: 916 bp

>SGN-U320506 Tomato 200607 #1 (10 members)
TCAACGTCATCTTCTCTCTTCCCTTTGTTCTTCTTCTTCTTCTAACCCAAAAATCTCTTCTTGTCTTAAAGAATCAATTCACATTCTCTC
TCTTCTTTCTCTCTCATCTCCACTTTGCTCTTTCTTCATTTCCACCATTTTCTTGGCATATCAAGTTTTCACCTACAGCAAAACCCACTA
ACATTTCTATATTCACCTTATCCTCTCCAGATTCCTTTTTGTCTTTTTGGTTAAATTATTTCTCTTAATTTTTTAATCAGAAAATACGTG
TTTGCAAGTATGTATAGAGTTCTTGAACAACTTTTCCATCCAAAAAGAGGCATTTTTGGGTGATAATTAGATTTTACCGGATCTGTGATT
ACTTTTCGCGTTGTATAATTGATGAAGGAGTAATTTGTTGTTAGGAATTTAAGTATGGATTCTGTAATTGGTGGTAAGTATAAGCTGGGT
CGGAAGATCGGCAGTGGATCTTTTGGGGAGCTTTATTTAGGTGTGAATATTCAAAGTGGAGAAGAAGTTGCTGTCAAGCTGGAACCAGTT
AAGACGAAGCACCCTCAGCTTCATTATGAATCAAAGCTGTATATGCTTCTACAAGGAGGAACGGGAATTCCCCACCTCAAATGGTTTGGA
GTTGAAGGTGAATACAGTGCCATGGTTATTGATCTTCTTGGGCCAAGTTTGGAAGACTTGTTTAACTATTGCAATAGGAAGTTCACATTG
AAAACAGTCCTAATGCTGGCAGATCAGTTGATTAATAGGGTTGAATATATGCATTCAAGAGGATTTCTTCACCGTGATATTAAGCCTGAT
AACTTCTTAATGGGTTTAGGGCGTAAAGCTAATCAGGTATATGCTATTGACTATGGTCTTGCCAAGAAGTACAGAGATCTTCATACACAT
AAGCACATACCCTACA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118569	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	51
5	129076	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	46

Preceding Unigenes (1)

Unigene	Build
SGN-U219281	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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