Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U563235 in the current build, Tomato 200607 #2

Unigene SGN-U320554

Unigene Basic Information

Unigene ID:	SGN-U320554
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	320554
mRNA sequence:	Length: 1328 bp

>SGN-U320554 Tomato 200607 #1 (9 members)
TTATGGCCTCAGTGACATGGCAGGTTCTCCTTGTGGGCATCATCGCTACAGTGGGCTCAAAATATGTCCAGGGACATTATCAACCCTCTG
CCCAGGAGCTGATGAGAATCAATGGGACAACAAAGGCTCCTGTTATGAATTATGTAACTGAGACATCACTTGGAGTTGCCACAATAAGGT
CATTTGGAGCAGTAGACAGATTCTTTCAAAATTACCTAAAACTTGTCGATGCAGATGCAAAAGTCTTTCTTTGCTCAAATGGTGCTCTGG
AGTGGTTAGTTTTGAGAACCGAAGCACTTCAAAACATCACTTTATTCACCGCCTCTTTTCTCCTAGTTTCGATCCCAAAGGGTTATGTCT
CTACAGGGCTTGTCGGACTCTCTCTTTCTTATGCATTGGCACTTACCAACACTCAAGTTTTCTTAAGCAGATGGTATAGCAACTTAGCAA
ACTATGTCATTTCAGCTGAAAGGATCAAACAGTTCATGTGTATACCTCCAGAGCCTCCAGCAATTGTGGAAGACAATAGGCCACCATCGT
CGTGGCCTACCAAGGGTAGAATAGAATTGTTGGATCTTAAGATTAGATATCGTCCAAATGCTCCATTAGTTCTCAAAGGGATAACTTGCA
CTTTCCGCGAGGGGACCAGAATAGGAGTTGTAGGAAGGACAGGAAGTGGCAAAACGACACTTATAAGTGCGTTATTTCGCCTGGTAGAGC
CTTACAGTGGGCAAGTTTTCATAGATGACATCAACATTTGTTCTATAGGTATCAAGGATTTAAGATCAAAACTCAGCATCATCCCTCAAG
AACCAACACTTTTCAAGGGGAGTGTTCGAACGAATTTGGACCCTTTAGGTCTCTATTCTGATGATGAGATATGGAAGGCTCTAGAGAAAT
GCCAGCTTAAGGCTACAATTAGTACACTTCCAAACCTATTAGACTCCTCTGTCAGTGATGAAGGTGAAAACTGGAGTATGGGGCAACGAC
AACTCTTCTGTTTAGGAAGGGTCCTTTTGAGGAGGAACAAAATCTTAGTATTGGATGAAGCAACCGCCTCTATCGACTCGGCTACTGATG
CAATTCTGCAGAGAATTATAAGAGAAGAATTCTCTAACTGCACAGTAATAACTGTTGCTCACAGAGTTCCTACTGTCATAGACAGTGACA
TGGTCATGGTCCTTTCTTTTGGGGAGCTTGTGGAGTATGCTCAGCCCTCAACACTCATGCAAACCAACTCTTCTTTTGCTAAACTTGTGG
CAGAATATTGGTCCAGCTGCAGAAAGAGTTCTCTTCAGAAACTAAATAGCTACCATACTAGCTAGTTC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 8 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101386	ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887)	388
2	118590	ABC transporter transmembrane region type 1 - Molecular Function: ATP binding (GO:0005524) - Biological Process: transport (GO:0006810) - Cellular Component: integral to membrane (GO:0016021) - Molecular Function: ATPase activity coupled to transmembrane movement of substances (GO:0042626) ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887)	47
5	129077	ABC transporter transmembrane region type 1 - Molecular Function: ATP binding (GO:0005524) - Biological Process: transport (GO:0006810) - Cellular Component: integral to membrane (GO:0016021) - Molecular Function: ATPase activity coupled to transmembrane movement of substances (GO:0042626) ABC transporter related - Molecular Function: ATP binding (GO:0005524) - Molecular Function: ATPase activity (GO:0016887)	46

Preceding Unigenes (1)

Unigene	Build
SGN-U218556	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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