Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U572059 in the current build, Tomato 200607 #2

Unigene SGN-U320587

Unigene Basic Information

Unigene ID:	SGN-U320587
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	320587
mRNA sequence:	Length: 1321 bp

>SGN-U320587 Tomato 200607 #1 (11 members)
GGCACGAGGGTTGTTGGTGTTGTCACTGAGGTTGGAAGCAAGGTGGAGAAGTTTAAGGTTGGAGACAAAGTAGGTGTTGGATGTATGGTA
GGATCATGTCGAAAATGTGAGAATTGTAGCGTTGATCTCGAGAATTACTGTCCTCGTCAGATTCCTACTTACAACGGCTATAGCTTAGAC
GGAACCCTCACGTTTGGAGGTTACTCCGATGTGATGGTATCCGATGAGCATTTTGTAGTACGTTGGCCTGAAAACTTGTCGATGGACGCT
GCTCCCCTGTTATGTGCTGGAATTACGACTTATAGTCCTTTGAAATATTTTGGACTCGATAAGCCTGGAATGCACATTGGTGTTGTTGGT
CTTGGAGGGCTTGGACATATGGCTGTTAAGTTTGCTAAGGCATTCGGAACCAAAGTGACTGTCATCAGTACATCTGCTAATAAGAAGAAA
GAAGCAATTGAGCGTTTGGGTGCAGACTCTTTCTTGATCAGTCGCGATCCTGAGCAGATGAAGGCTGCAATGAACACATTGGATGGGATT
ATCGACACTGTATCTGTCGTGCACCCTATTCTTCCATTACTTATGTTGATGAAATCTCATGGTAAGCTTGTTATGGTTGGTGCACCAGAA
AAACCGGTGGAGTTGCCCGTGTTTCCTCTACTTATGGGAAGGAAGCTAGTGGCTGGAAGTTGCATAGGAGGGATGAAAGAGACTCAAGAA
ATGTTGGACTTTGCGGCAAAGCATAACATAACACCAGATATTGAAGTGGTGCCAATGGAGTACGTTAACACCGCGTTGGAACGTCTTTTG
AAATCGGACGTGAAATATCGTTTTGTGCTAGACATTGGTAATACATTGAACAAGAAATGAGAATAGGGAGGGGATCAATTATGTAGCTAG
CAGTGTTTCCTCCATCATCTATTTATACTGCAGTAACTGAGATTTAGTGAATACCTTACAGAATAACAACCCTTTGCCTTTACTCTATTA
ACTAAGTGAAATCCGTATATCTCTGATACATCTTTTCACATGAAAATCATACAACAAAGTCAAATTCTGAACTTAGTACTCAAGAAGACA
GCTTGCACTAATGAATTATGACGGAACACCAAGATATGATGCAAGTTGCAAGATGACACTGTACTTTTTCCTCAAAAAAATGACACAGAG
TACTCCACAAGCTGTCACTTTGATTTTAAAAAATACATCTATTTCTTTTCTTTCCAACTTGTTTATCTCATAAAATGTTGTTTTGCAAGT
AAAATGATGAACATCAGTTTCTGATGGATAGCATAAGAGAGTAAGTTCTTTGAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
eli3	cultivar Rio Grande ELI3

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	7
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	vSlycmRNA		8362	2

mRNA member sequences (11)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (7)

Annotations (manual: 2 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101421	GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491)	210
2	118636	Alcohol dehydrogenase GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	41
5	129101	Alcohol dehydrogenase GroES-like Alcohol dehydrogenase superfamily zinc-containing - Molecular Function: zinc ion binding (GO:0008270) - Molecular Function: oxidoreductase activity (GO:0016491) Alcohol dehydrogenase zinc-binding GroES-like	41

Preceding Unigenes (1)

Unigene	Build
SGN-U219296	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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