Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U566551 in the current build, Tomato 200607 #2

Unigene SGN-U320736

Unigene Basic Information

Unigene ID:	SGN-U320736
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	320736
mRNA sequence:	Length: 2396 bp

>SGN-U320736 Tomato 200607 #1 (10 members)
AAATCAATAAATAGTAGTGTAAGAGTAATTATTAAATAAATATTTTCCCCATTATTCTTTTCTTTCTCTCTCTTGTAACAAAAAAACAAA
AAAAAAACACTATGGAAGAAGAGCAAGAACACTCACTTCTTCCTCCTCATCTTCTTCTTCTTCTTCTGCCTCTACTGCTCTTCTGACCAA
AGGCTACGGACGACGTCGTTTTCACATCTCGTTTGCCCTATGTATTCTTCAATGTAGCTCGTGATCCATCAAAGCTTCACGTTTCTGCAA
CGGGATTGGTGCAAGTTGAAGTTTGAACTTTGAAAAGAAAGTCAGTTACGGGCTCAATGGAGCAGTATGAAATATTGGAGCAAATTGGCA
AAGGGGCTTTTGGCTCTGCGGTTCTTGTGAAGCATAAGCTTGAAAAGAAGAAGTATGTACTGAAAAAAATTCGTCTCGCTCGGCAAACGG
ATAGGACTCGCCGAAATGCACACCAGGAGATGGCCCTTATTTCGAGTATGCAAAATCCATTCATTGTGGAGTACAAAGACTCATGGGTGG
AGAAGGGTTGCTATGTGTGCATAGTCATAGGTTATTGCGAAGGTGGAGACATGGCAGAGGCCATAAAAAAAGCAAAGGGTGTCCATTTTC
TTGAAGAGAAACTATGCAAGTGGCTTGTTCAACTCTTAATGGCTCTTGACTACTTGCACACGAATCATATCCTTCATCGTGATGTCAAGT
GCTCGAATATATTTCTAACTAGAGAGCAGGATATTCGTCTAGGTGATTTTGGACTTGCCAAGATGTTGACTTCAGATGACCTTGCTTCCT
CGATTGTTGGAACCCCCAGTTACATGTGCCCTGAGCTTCTTGCCGACATACCTTATGGATCTAAGTCAGATATATGGTCTCTAGGATGCT
GTATATATGAAATGGCTGCATTTAAGCCAGCATTCAAGGCATTTGATATGCAAGCACTCATCAACAAAATAAACAAGTCTATTGTGGCAC
CACTTCCGACAAAATACTCTGGTCCATTCCGAGGTCTTGTCAAAAGCATGCTGCGGAAAAACCCAGAACTGAGGCCAAGCGCAGCAGAAC
TTCTTAGGAATCCACTTCTTCAGCCATATGTGATTAATACACATCTCAAACTTAATGGCCCTAGACGGAACAGTTTACCTGCTTGTTTGC
CTGATAATGATGTAAAGAAAACCAGATTTGCAATTTCTGAAAGCACACCTGTCAAAAAGAACAGAGAGAAGCGAATGTCATGTGGAAATG
ATAGGACTTTGAATCCTAGTGTCTCTGATCACGATTATACTTTTTCAAATCGTAGATATCCAAAAACACCAAGCAGAGTATCTGAATTGT
CTGTTGGAAGCCCTGATAGAGGATCAACTGTCACAAAAAAAATCACTTCTAAAGCTTTGCTTGTGAATAAGAATCCAAAGGTGATCGTGC
CAAAATTGACTACTACTCCAAGAAGACAAGTGGATCTAAGGAACAGCGATATGGCTTCACGAACCCTGGTGAAGAGATCTGTTTCTACAA
CTCGTAGGGCATCTTTGCCATTGACAAACAAGGCAGCAGTTCAAGAATTACCTCGAAGGCCGAGTCTCAGTTTTCTTGACTGTATTAAGT
CTCCTGATGTTTCTGTCAATGCCCCTCGAATTGACAAGATGCTTGAGTTTCCATTAGCTTCATATGAAGATCCTTTCCATCCTATACGCC
GAACATCATCAAACTCTGCGCAAGGTTCCTCTGGCTCACCACAAGCTGAGTATTCAGTTATGAAAGACAAATGTACCATACAGATTCCTG
ACAGTAAATTTGATCGAATGAGTTCCAATGATGCTTGGCAAGGTTATGAAGGCCCCATGGTGCATGTGGATAGAGAGGACATAACTGATT
CTTCTGATCAAAATGCCACTGCTGGTGCATCTAGCCGAACTTCATCTGACACAAGACGCCGCCGTTTTAACATGTCATCTTATAAGCAAC
GGGCTGAAGCCCTGGAGGGACTACTTGAGTTCAGTGCTAGACTCTTGCAAGAAGACAGATTCGATGAACTTGGTGTCTTATTGAAGCCAT
TTGGACCAGAAAAAGTTTCTCCGAGGGAAACTGCTATTTGGTTGACCAAGAGCATAAAGGAAAATGCTCCTAAACAGGAAGATTAGTTCT
AAGAACATTCAATGTGTATAAAGTAGTCTTTGCTGTAATATTTTCTGTAGGTGCCCAGATTTTGCTAAGTAGAGGCAGTCATAAGCTGAA
ACATTAATTCATAGCTAGGATCTCCTGTTACCCTTACCCCTTGCATATTTAGCAAATTCACGAAGTACTGAAAGGATAATATGGACGAGA
AAACAGGTTCTTTAATTCCACTAGAAATATTATTGCTTAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AF079103	LSTK-1-like kinase	kinase

Genomic locations (0)

None

Library representation (9)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (1)

Annotations (manual: 2 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	130261	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	11

Preceding Unigenes (2)

Unigene	Build
SGN-U221151	Lycopersicon Combined #3
SGN-U229638	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Description:
Event Web URL:

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