Sol Genomics Network

Notice: If you try to use Google Chrome to access the SGN FTP site, please check this link to resolve connection issues.

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U566756 in the current build, Tomato 200607 #2

Unigene SGN-U320857

Unigene Basic Information

Unigene ID:	SGN-U320857
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	320857
mRNA sequence:	Length: 1189 bp

>SGN-U320857 Tomato 200607 #1 (10 members)
TCGGACGGAGGATTGACGATTTTGGACGGAACACAGCTCAGAGCCGTTGATCTATCGTTACCGTCGACGGTCGACAGTTCAGTCACCGGT
GCTCAGCTTCTTGATGTCGCAGAATCTAAAGTTTCAGAATCACTCTTCGGCTTCTCATTGCCGGACACGCTCAAGTCCGCCGCTCTTAAA
CGCATCGGCGTCTCCGATGACCTTGAATTCCGCCGTGAAAATCTCGATCGTGAAAACGCCTTGTCTGTGCTTCGGAAATACGTCGACGCT
ATTGCGAATGAACTCCAAGATGATCCTATAGTCATTGCAATTTTGGATGGAAAAACTCTTCAACTGTTTTTGGAAGATGAAGATGACTTT
GCCATGTTGGCTGAGAATCTTTTCACAGATTTAGACACAGAAGATAGAGGAAAGATCAAAAGAAATCAAATACAGGATGCTCTTTTTCAC
ATGGGTGTCGAAATGGGAATCCCACCTCTTTCAGAGTTTCCTCTACTAAGTGACATTTTAAAGAAACATGGAGCTGAAGGAGAGGATGAA
TTGGGGCAAGCCCAATTCGCGCATTTACTACAACCTGTGCTTCAGGAGCTGGCAGATGTTCTTTCTGAGAACCCTATGGTTGTGTTGCAG
AAAATCAAGATCAATAATGGTTCCAAATTGAGAATGATTTTGACTGATGAAAAGCAACTAAGCGAGACAGTAGATAAGATAATGCAGGAG
GAAGAGAAAGACGGTCTAAGTACAAAAGATGTCATTCGACACTATCTCGAGAAAAATGGAGCATCATTGGGCTTGCCACCTCTGAATGAT
GAAGTGGTGATTCTTCTGTACGATACCGTATTAGGTGCTGTAGAGAATGGAAACACTGATGCAAAAACATCAAAGGAGGACGAATTCATG
GTTTTTCTGAAGGAGATCCTTGAGAAGTTTGCAGCTCAACTTGAAGTTAACCCAACTTTTGATGATCTTGTTGACAATTGAAGGTATGTT
GATGCGCCTTCATGTACACCCGCTCCATATAAAATTATTCCAGAAATGTTCACAAATTTATCTTAGATTTTGACTCAACTTATCATTAAA
TTTCTTCTACTCTTAAAAAAAAAAAAAAAATGGAGTATGTTTCTCGATCGAATCCACATATATGTCAATATAGTAATCAAAACTGCCTTT
TTCTTGAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	cTSB	seed	1880	2
Solanum lycopersicum	cTSD	seed	1504	1
Solanum habrochaites	LH_Ea	Glandular Trichomes	3840	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (10)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	102100	Calcium-binding EF-hand - Molecular Function: calcium ion binding (GO:0005509)	22
2	123840	Calcium-binding EF-hand - Molecular Function: calcium ion binding (GO:0005509)	4
5	134013	Calcium-binding EF-hand - Molecular Function: calcium ion binding (GO:0005509)	4

Preceding Unigenes (2)

Unigene	Build
SGN-U223479	Lycopersicon Combined #3
SGN-U228930	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer