Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U581955 in the current build, Tomato 200607 #2

Unigene SGN-U321270

Unigene Basic Information

Unigene ID:	SGN-U321270
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	321270
mRNA sequence:	Length: 1393 bp

>SGN-U321270 Tomato 200607 #1 (9 members)
TCTATTTTCTACATTTTCCCCCCTTATTACTATATCAAAGATCAAGAAAATTTTATAAGTTACATGCAACATAATGGCAATTGATTATAT
GATCACGAGAAATAACAACATGATATCCAAAGAAGATCAAGTATCAAATAAGTCGTTGAGTTTTAATGCATCATTGATGAAAAACGAGTC
AAATATACCAAGCCAATTCATATGGCCGGACCATGAGAAGCCAAATTATGCTAGTGTTACTAGAGAACTACAAGTTCCACTAATAGACTT
AAGTGGGGTACTTTCAAATGACCCTATTGAAATCAAGAAAGCAACTAGACTTGTTAATGAAGCATGTACAAAACATGGTTTTTTCTTAGT
GGTTAACCATGGGGTTGACACAAATCTCATAAAAAATGCACATGTTTACATAGACAAGTTCTTTCAATTGCCACTTTGTGAGAAGCAAAA
AGCACAAAGAAAAGTTGGTGAACATTGTGGTTATGCTAGTAGCTTTGTTGGAAGGTTTTCATCTAAGTTGCCTTGGAAAGAAACACTCTC
GTTTCAATACTCTGATCAGAAAGGCTCATCACACATAGTTGAAGATTATTTTCAAAGGACACTCGGTGAAAAATTTAGTTATATTGGGAA
GGTTTATCAAGAATATTGCAATGCCGTGAGCACCCTTTCTCTAGGGATCATGGAACTTTTGGGATTGAGCCTAGGTGTGAGCAAGAACCA
CTTCAAAGAATTCTTTCAAGGAAATGAGTCCATAATGAGACTAAATTATTATCCAACATGTCAAAAACCTGAACTCACTTTAGGGACAGG
GCCTCATTGTGATCCCACATCATTAACCATTCTCCATCAAGATAGTGTTGGTGGGCTTCAAGTTTTTGTGGATAATGAGTGGCACACCAT
CACTCCAAATTTCAACGCTTTTGTTGTTAACATAGGCGACACGTTTATGGCACTATCAAACGGAAGATACAAAAGTTGCTTGCATAGAGC
AGTGGTAAACAACAAAATACCTAGGAAATCACTTGCTTTTTTTCTTTGTCCCAAGAAAGATAAGGTGATTACTCCACCAAATGAATTAGT
GGATTCTAACAATCCAAGAATTTATCCAGATTTCACATGGCCAACCTTATTAGAATTTACACAAAAACAATATAGAGCTGATATGAACAC
CCTACAAACTTTCTCAAATTGGCTTAAAAAAACACAGTCTTAAATATATCATCAACAAACATCTTTGTAAACTTGTTGTACATGCTTTGA
TGTGGACATAGAAATGGAACCTCATGGGGAGGGGTGGGGGGTTAGTAATTGTATGAATGATCAATTTTGTAATTTATTTGACTCATGAAA
TAAAAACTATGATTAGTTTTATATCTTTATAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AF049900	gibberellin 20-oxidase-3	gibberellin 20 oxidase

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	7
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (7)

Annotations (manual: 1 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101380	2OG-Fe(II) oxygenase	456
2	118413	2OG-Fe(II) oxygenase	345
5	129900	Isopenicillin N synthase - Molecular Function: iron ion binding (GO:0005506) - Molecular Function: isopenicillin-N synthase activity (GO:0016216) - Biological Process: antibiotic biosynthesis (GO:0017000) 2OG-Fe(II) oxygenase	14

Preceding Unigenes (1)

Unigene	Build
SGN-U219631	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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