Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U576634 in the current build, Tomato 200607 #2

Unigene SGN-U321386

Unigene Basic Information

Unigene ID:	SGN-U321386
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	321386
mRNA sequence:	Length: 1197 bp

>SGN-U321386 Tomato 200607 #1 (9 members)
CAAGAAACATTTTTCTTGCAAATAAAAAAATGGTGAACTTGGTTGAAGCACAAAAACCATTGTTACATGGCCTAATGAAATTAGCTGGAA
TCAGACCTCATAGTATAGAGATAGAACCAGGCACAATTATGAATTTTTGGGTTCCTTCTGAAACCATAATTCAAAAAACGAAGAAAAACA
AAAAAATCACAACCACTACTCCTCTCTCCAACAACCAATATGCTATTTCCCCTGATTCCACCACCGAACCCGACCCGAACAAACCCGTGG
TCGTACTAATCCACGGCTTTGCCGGCGAAGGAATAGTGACGTGGCAATTTCAAATCGGTGCATTAACTAAAAAATACTCTGTTTATGTAC
CGGACCTACTTTTCTTCGGCGGATCAGTTACGGATAGCTCCGATAGATCGCCGGGTTTTCAAGCAGAGTGTTTGGGTAAAGGGCTGAGGA
AATTAGGCGTGGAAAAATGCGTAGTGGTTGGATTTAGTTATGGAGGAATGGTGGCGTTTAAGATGGCGGAAATGTTTCCAGATTTAGTTG
AGGCGTTGGTGGTGTCTGGATCGATATTAGCGATGACTGATTCCATTAGCACTACCACGCTCAATGGTTTGGGATTTTCATCTTCTTCGG
AGCTGCTGCTGCCTACCTCTGTTAAGGGTCTTAAGGCCCTGCTAAAAGTGGCTGCTTACAAGAAGCTTTGGTTCCCTGATCGTCTTCATA
GAGATTTTCTCGAGGTAATGTTCACCAACAGAAAGGAAAGAGGAGAGCTGCTAGAAGGGTTGGTGGTGAGCAACAAAGACACAAGTATTC
CAAATTTTCCACAGAGAATACATCTCCTCTGGGGTGAGAATGATCAAATTTTCAATTTGGAGCTTGCTCAGAACATGAAACATCAACTGG
GTGAGAAGACTACATTTCATGGCATAGACAAGGCAGGGCATCTGGTTCACCTAGAACGACCTTGCGTTTATAACAAGTGTCTCAAGCAGT
TCCTTACATCCCTGCATGCAGAAAAAGCCCAAAAGTGAAGGACACTACTGCAAAGTTCACTATCGTAATATCATGTAACTTTTTGTCAAT
GAAAAGGAAAACAACTATGTGCTTCCTCTGTAATATTAGTTACTATGTAATTTGGGTTCAGAATTTGAAATCATCATCTTAAACAAATAT
ATACAAACATATATTGCAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
AY568723	alpha/beta fold family protein

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	vSlycmRNA		8362	2

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101445	Esterase/lipase/thioesterase - Molecular Function: catalytic activity (GO:0003824) Alpha/beta hydrolase fold-1	154
2	119024	Alpha/beta hydrolase fold-1 Alpha/beta hydrolase - Biological Process: aromatic compound metabolism (GO:0006725) - Molecular Function: hydrolase activity (GO:0016787) Esterase/lipase/thioesterase - Molecular Function: catalytic activity (GO:0003824)	22
5	131812	Alpha/beta hydrolase fold-1 Epoxide hydrolase - Molecular Function: catalytic activity (GO:0003824) Alpha/beta hydrolase - Biological Process: aromatic compound metabolism (GO:0006725) - Molecular Function: hydrolase activity (GO:0016787) Esterase/lipase/thioesterase - Molecular Function: catalytic activity (GO:0003824)	6

Preceding Unigenes (1)

Unigene	Build
SGN-U222933	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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