Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U564900 in the current build, Tomato 200607 #2

Unigene SGN-U321749

Unigene Basic Information

Unigene ID:	SGN-U321749
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	321749
mRNA sequence:	Length: 1558 bp

>SGN-U321749 Tomato 200607 #1 (9 members)
AATTTTTCGGCAGGATTTCTCTGTTACCTTTCTTGCAATGGTAACTGCACTCTTGCTTATCAAGGGTTTGCACTGGTTGGCTCAAAAGAG
AGTTGAGTACATTGAAACAACTCCTACTGTTACTAGATTGTCCCACATTCGCATAGTATCCTTCCTGGGCTTTCTCCTATTCATAGACAG
TCTCTTTTTGTACGACTCGATGAACTATTTGATACAGACGAGACAGGCATCTGTTTCTCTCTTCTTTGCCTTTGAGTACATGATACTTGC
AACAACAACTGTCTCAACGTTTGTAAAATATGTCTTCTACATAAGTGACATGCTTATGGAAGGACAATGGGAGAATAAGCCTGTCTATAC
CTTCTACTTAGAACTTATCCGAGACTTGCTCCACTTGTCTCTTTACTTGTGCTTCTTCATGGTGATTTTCATGAACTATGGTGTGCCCCT
GCATTTGATTCGGGAGCTTTATGAGACATTCCGCAACTTCAGGAGTCGAGTTGCCGATTATGTACGCTATCGGAAGATCACTTCAAATAT
GAATGACCGTTTTCCAGATGCTACACCAGAGGAGCTCAATGCAAGTGATGCTACCTGCATCATTTGTCGTGAGGAGATGACCACTGCTAA
GAAACTCATTTGCGGTCATCTGTTTCATGTGCATTGCCTCCGCTCATGGCTAGAGCGTCAACACACCTGTCCTACCTGCAGAGCCCTTGT
TGTGCCAACTGAAAATGGGACAAATGTGGCAGGATCACGACCAGATGTGCAACAAGGCCCTGGATCAAGTGCGGCAAGTGCATCTCAGGG
TTCGCAAGCAAACACCACGCCAAGTAATAATGTTAGCCAGCACCAAGCTAGAATCCAAGCTGCTGCAGCAGCAGCAGCAGTTTATCAGAA
GTCTTATGTTTATCCTTCTGTACCAACACTAGCGTGGTCTCCTGGATATGCTCCAGTTCCTCCCTCCTATAGTACAGTGGGCAGTTCTGC
CAATGTGCTCTCAGATGGGGAACGGGCATTGAATGAACAATCATCGCACAATCAATTAGCAAATATGCCCTTTGCTCAATATCCACAATC
CGGTTTTCTCCCTTTTCAATATCCAGGTGCTAACAACCTTGGTATTCCAACGTCTCAACTTGAGGCCCATAAGATACTTTTACAGCAACA
AATTGAGGTTCTGCAAACCCAGCTCAAGCTTTTAGAGCATCCAAACATACAAAAAAAAGCAGATGATTTAGGAATTTCTGATAGTAAGGG
AAAAGCAATTTTGTCAGAGAGTTCTCGAGGACATACCGAAGGTGCAGAGATTTGAAGCTAACATAAATGTATATCTATGGTAAGGGCAGG
GTGAAGTTCAAACGTACAGTTAGAAATAGTAACATTTGAGCAATGGATTTGTAAGAGGTTGTTCTGAAAGTTGTACAACTATGGGAAGTG
TTGTATTTTAGCTCAGCAACTGATTATTTCTCTCAAAATCTTGTACGCCTTGTGAGTTTTAACTTCACTTGTGGTGTACTATACACAATT
TTCTTTGCATTAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	5
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (9)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (3)

Annotations (manual: 1 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101372	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	566
2	121007	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	7
5	131753	Zinc finger RING-type - Molecular Function: protein binding (GO:0005515) - Molecular Function: zinc ion binding (GO:0008270)	6

Preceding Unigenes (1)

Unigene	Build
SGN-U219735	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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