Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U567573 in the current build, Tomato 200607 #2

Unigene SGN-U321788

Unigene Basic Information

Unigene ID:	SGN-U321788
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	321788
mRNA sequence:	Length: 1857 bp

>SGN-U321788 Tomato 200607 #1 (8 members)
GCATAGGTGGTGTAGTACTCCATTCTTCATTTCTGGGGAAGAAACTGGGGATTTTGAAGCCGTTATGTTTGTCGATACGATTGAAGAAAC
AATGTAATTTTTCAATTTGCAGTAGCTCTGTACATGATCTTTTTGTTGGAGTTGGGGTAGGACTACCCTGTACTGTAATGGAGTGTGGTG
ATATAATTTATAGAAGCACACTACCCAAGTCAAATGGGATCACAGTTACAGTTCCTGGGGTTATTTTGGCTTTGGGTACCCTCTCTTACC
TCTGGGCTACTCCTGGTGTTGCTCCTGGTTTCTTTGATATGTTTGTTCTTGCCTTTATTGAAAGATTCTTTCGACCTATTTATAAGAAGG
ATGATATTGTATTGGGAAAGAAACTTGGTGAGGGATCTTTTGGTTCTGTTTATAGAGTTTCTTTGGCAAGAAAGCCATCATCAAAGCCTG
CTGATTTAGTCTTAAAAAAGGCAACTGAATATGGAGCAGTGGAAATATGGATGAATGAGCGTGTGCGTAGAGCTTGTGCTAATAGTTGTG
CTGATTTTCTTTATGGTTTTCGAGAGACTTCTTCAAAGAAAGGAGCAGAGTATTGGCTTCTTTGGCGTTTCGAAGGGGAAGCTACACTTG
CTGATTTGATGCAGAGTAGAGACTTTCCCTACAATGTAGAATCATTGATCCTTCGAGAGGTTCAGGACTTGCCCAAAGGTTTGGATAGAG
AAAATAGAATCATTTTGACAATTATGAGACAACTCCTATTTGCTTTGGATGGGCTTCACTCCACAGGGATAGTACATAGAGATATTAAGC
CTCAAAACATAATTTTCTCTGAAGGTTCTCGCGCGTTCAAAATAATTGATCTTGGTGCTGCAGCAGATTTGAGAGTAGGAATCAATTATA
TTCCTAAGGAGTTTCTTTTAGATCCAAGATACGCTGCACCAGAGCAATACATTATGAGCACACAAACCCCTTCCGCACCGTCTGCTCCAG
TTGCAACTGCACTGTCCCCAGTACTCTGGCAGCTGAATCTCCCAGATCGATTTGACATCTACAGTGTCGGTCTCATATTCCTGCAAATGG
CATTCCCAGGATTACGCAGTGACAACAGTCTCATTCAATTCAACCGACAACTGAAGAGATGCGACTATGATTTAGTTTCGTGGAGACAGA
GTGTAGAGCCTCGTGCTGGCCCTGAACTTAGGAAAGGCTTCGAGTTGTTAGATTTGGATGGTGGAATAGGGTGGGAGCTATTAACATCTA
TGGTACGTTTCAAAGCACGCCAAAGAATTAGTGCAAAGACAGCTTTAGCACATCCATACTTTGATAGAGAAGGTCTTCTAGCCCTGTCCT
TCATTCAGAACCTAAAGCTGCAATTCTTGCGGGCAACACAACAAGACTATAGTGAAGCTGCAAACTGGGTTGTTCAACTAATGGCAAAAT
CAGGAACAGAACAAGATGGGGGCTTCACGGAAGCACAACTTCAGCAGCTTAGGGAAATAGAGCCTAAGAAGAAGTCAAATGCGCAGAGGA
ATGCTCTTGCATCAGCTCTTCGACTTCAAAGGAAAATTATAAAAACCCTGAATGAGAGTATGGATGATCTTAGCAATAAACGGAAAAGCT
TATGGTGGAGCCGATGGATTCCAAGAGAGGAATGAAATTAGTAAATGTGTACAAAAATAGCTTTAGTACTTTGTTTCATAGGAAGCGTAC
TTACTAGTTTTCATTCTTATTTGACAGTGTAAGCCAATTTTTAACATAGAGTATTATATGTAAAAAGTGAAAATTTCTTATACCAATATG
TACCGTTGTTTATTATTCTATACAAAGATATGGAGTTAACAGTTGAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	120640	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	8
5	131766	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	6

Preceding Unigenes (1)

Unigene	Build
SGN-U225125	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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