Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U576468 in the current build, Tomato 200607 #2

Unigene SGN-U321946

Unigene Basic Information

Unigene ID:	SGN-U321946
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	321946
mRNA sequence:	Length: 885 bp

>SGN-U321946 Tomato 200607 #1 (8 members)
AGCTTAGGAGTATCCCTTAGAATTCTCCTATAAATTCGCCTTTTTTCTGTAAATTTTACTCATATATTCTCTACAGCCTTTTCCTTTTTC
TTAAATTTACAAAAGATTTTACTTCTTCAATTACCTGCAAAACACACCGGAAAAATGTGTCCCACCGGAAGTGTTTTGCATTCTGCCGCC
GGCGCCGGAAAACCAAATCTGCGGTCAGCATTCGACGTTTTGGACGTTGACCGCGATGGAAAGATTAGCAGAGAAGATCTACGAACATCG
TACGGTGGATTCGTCGGCGACGATATGATTGGTACGATGATGACGGTGGCGGATTCGAACGAAGATGGATACGTTGAATTTGAGGATTTC
GAGAAGGTTTTGGATAGTTCTATTAGCAGAAACAGCGAGGAGAAGAGGAAAAACGGAGCATTACGAGGAGAAATGAATGTAATGGAGGAT
GTCTTCAAGGTGATTGACAAAGATGGAGATGGTAAAGTTGGGGTTGAGGATTTGAAAAGTTATTTGAGTTGGGCTGGGCTTCAAGTTGAT
GATGATGATATCAAAGCTATGATTAAATTGGGCCATGGTGAAGAAAATGGTGGTGTTACCTATCAAGGTTTTCTTCAAATTTTGTCTCTT
TAATTAATTTCATGATGATGATGATGATGATCAATGTTAAATTAGGTTGAACAAGTATTTTTGTAATTTTCAATTTTTTTCAAGTGCTTC
CCATGTTGTTTAAGGAAAAAAAGACGTTCTATTCCCATCATTTTTATTTACAACTTTTTATGATTTTATTTGTTTTGTTTTAATCTCAAA
TAGAAGTATGTCTTTCCAAAAACAATTGAATTTAATATTAATTAATATTATCCAATTGGAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	2

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (2)

Annotations (manual: 1 | blast: 2 | go: 1 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	122732	Calcium-binding EF-hand - Molecular Function: calcium ion binding (GO:0005509) EF-Hand type - Molecular Function: calcium ion binding (GO:0005509)	5
5	132919	Calcium-binding EF-hand - Molecular Function: calcium ion binding (GO:0005509) EF-Hand type - Molecular Function: calcium ion binding (GO:0005509)	5

Preceding Unigenes (1)

Unigene	Build
SGN-U220721	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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