Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U568284 in the current build, Tomato 200607 #2

Unigene SGN-U321956

Unigene Basic Information

Unigene ID:	SGN-U321956
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	321956
mRNA sequence:	Length: 1527 bp

>SGN-U321956 Tomato 200607 #1 (8 members)
GAAGATCATATTTACCTCAAAACCAAACAGGACCTTAAGATGCTAAATTTTCCGATTCTCCATTAATACAAATTCCTCCCAAATGAGTTT
TCTTAAAGACTTGGCAGAAACCCTAAGCTCGATCTTCTCTGATACTCCATCATCGCCTTCGTCTCTGAACCATCCTCAGGAGAACTCCGG
TGATCGGACGATGGATGGCGTTGCCACCGGGAACGAACGCACGGCGTATAAGCTGAAAGGCTACTTTGAATTGGCCAAAGAAGAGATCGC
CAAAGCTGTTAGAGCTGAAGAATGGGGCTTGGCTGATGAAGCAATTGCACATTACCATAATTCTCAAAAGATACTCGCCGAAGGCATTTC
TACTCCGGTTCCTTCCTATATAGCTTCTAGTGAACACGAGAAAGTGAAATCATATCGTCAAAAGATATCAAAATGGCAGTCTCAAGTTTC
AGACAGACTTCAGACTCTAAGTCGGCGAGCAGGTGGCACACCTTCAGTCAAGTCAGAACCACAATCCCAAAGAGTGGCTGTTTCACAATC
AAGTTCGTCTGCTCGAAAAGGAGCATCTCTATCTGCACCTTCTTCAGGGAAAGTCAGCTCTGCTACGAGGGTTCCAAGTAATAGAATATC
AAGTCATAAACCTTCACAGGAATCTGCCACTGCTGATGGGTCTGATCCAAAGTTGGTTGAGATGATAAATTCTGTAATTGTGGATAGAAG
CCCGTCTGTTAAATGGGAAGATATTGCTGGCCTTGAAAAGGCAAAGCAAGCTCTTTTAGAGATGGTAATTCTACCAACCAAAAGAAAGGA
CCTCTTCACTGGCTTGAGAAAGCCTGCTAGAGGTCTACTTCTTTTTGGCCCACCAGGTACTGGAAAAACCATGCTTGCCAAAGCAGTAGC
ATCAGAGTCACAAGCAACCTTTTTCAATGTGTCTGCTTCTTCGTTAACATCAAAGTGGGTCGGAGAGGGTGAAAAGCTTGTCAAGACATT
GTTCATGGTTGCCATTTCCAGGCAGCCATCTGTAATTTTCATGGATGAGATAGATAGTATTATGTCAACTAGGACTACCAATGAGAATGA
AGCAAGCAGAAGGTTGAAGTCAGAGTTTCTAGTTCAGTTTGATGGGGTGACATCAAATTCCGAGGGCCTGGTAATTGTAATTGGTGCAAC
GAATAAGCCACAGGAGTTGGATGATGCTGTTCTAAGGAGATTGGTGAAAAGAATATATATACCTCTACCTGATGCTAGTGTTAGAAGACA
ACTTCTGAAACACAGACTAAAGGGGAAAGCTTTTTCTTTGCCTGGTGGAGATCTAGAACGACTGGTGAGAGACACAGAAGGGTATTCTGG
AAGTGATCTTCAAGCCTTATGCGAGGAGGCTGCAATGATGCCAATCAGAGAGCTTGGTGCTAACATTCTCTCTGTCCAGGCAAATCAGGT
GAGGGGTTTAAGATATGGAGATTTTCAGAAGGCCATGACAGTGATTAGGCCTAGCCTGCAAAAGAGCAAGTGGGAGGAGCTTGAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101385	AAA ATPase central region - Molecular Function: ATP binding (GO:0005524)	403
2	118424	AAA ATPase central region - Molecular Function: ATP binding (GO:0005524) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	236
5	129063	AAA ATPase central region - Molecular Function: ATP binding (GO:0005524) AAA-protein subdomain - Molecular Function: ATP binding (GO:0005524) AAA ATPase - Molecular Function: nucleotide binding (GO:0000166) - Molecular Function: nucleoside-triphosphatase activity (GO:0017111)	49

Preceding Unigenes (1)

Unigene	Build
SGN-U221095	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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