Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U579669 in the current build, Tomato 200607 #2

Unigene SGN-U322270

Unigene Basic Information

Unigene ID:	SGN-U322270
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	322270
mRNA sequence:	Length: 1524 bp

>SGN-U322270 Tomato 200607 #1 (6 members)
CAATAATTAACAAGTCAATATAAAATGCCAAAGGATAAGATTCACGTTTCTCTCGTCGTCATTGGACACGTCGATGCCGGTAAATCCACC
ACCACTGGTCACTTGATCTACAAGTGCGGTGGTATTGATAAGCGTACCATCGAAAAGTACGAAAAGGAAGCCGCTGAAATGGGCAAGTCC
TCCTTCAAATACGCCTGGGTTTTGGATAACTTGAAGGCTGAACGTGAAAGAGGTATCACCATCGATATCGCTCTCTGGAAATTCGAATCC
CCAAAGTACCAATTCACTGTCATTGATGCCCCCGGACATCGTGATTTCATCAAGAATATGATCACTGGTACCTCCCAAGCTGATGTTGCC
ATCTTAGTCATTGACTCCGCTCCTGGTGGCTTCGAAGGTGGCTGGGCTCCTGATGGCCAGACCCGTGAACACGCTTTATTAGCCTTCACC
CTTGGTGTCCAACAGATGATTGTTGCCCTCAACAAGATGGATGCCTGCCAGTACTCCGAACAACGTTACAACGATATCAAGGAAGAAGTC
TCTGGTTACTTAAAGAAGGTCGGATACAAGCCAGCCAAGATCCCATTCGTCCCAATCTCTGGTTGGGTCGGAGACAACATGATTGAACGC
TCCACCAACATGAACTGGTACAAGGGTCCTATCCTGTTAGAAGCTCTTGACTTGGTCACTCCTCCTAAGCGCCCAACTGACAAGCCATTG
CGTTTACCTTTACAGGACGTCTACAAGATCGGTGGTATCGGTACTGTCCCTGTCGGACGTGTCGAGACTGGTGTCTTGAAGCCTAACATG
CAAGTGTGCTTCGGCCCAATCGGCTTAACCACTGAAGTTAAGTCCGTCGAAATGCACCACGAATCCCTCGCTGAAGCCGTCCCTGGTGAC
AACGTTGGTTTCAACTGCAAGAACATTGCCGTCAAGGATATCAAGAGAGGTTTCGTCGCCTCCAACGCCGCCGAAGATCCTGCCAAGGGT
GCTGATTCCTTCCAGGCTCAGGTCATCATCATGTCCCACCCTGGCCAGATCCAGAACGGTTACACTCCAGTCTTGGATTGCCACACCTGC
CACATTGCCACCAAGTTCAAGAACATCGATGAAAAGATGGATCGTCGTACTGGTAAGACTCTCGAAGCCAACCCAAAATTCGTCAAGTCC
GGTGATGCCTGCATGGTCACCATGGAACCCACCAAGCCAATGGTTGTTGAGACCTTCAATGACTACCCACCATTAGGACGTTTCGCCGTT
CGTGATATGAGACAGACCGTCGCCGTCGGTGTCATCAAGTCCGTCATCAAGAAGGAAGACTCCAAGGCTGGTGGAAAGGCCGCCAAGAAG
AAGTAAATGGTTGATTTCTAAAGCCCTTGTAATTAGTACCGAAGAAGAATTCATTTTTTCTTCATCTAGTTGTATAGCATAGAAATCGAT
TATTTTCTCATTTTTGCCTGTAACTCTCCAAAGAAGCTGCAAACTCTTTACAAAAAAAAAAAAAAAAAACTCGAGGGGGGCCCG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	2

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101378	Heavy metal transport/detoxification protein - Biological Process: metal ion transport (GO:0030001) - Molecular Function: metal ion binding (GO:0046872)	495
2	118470	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal Elongation factor Tu C-terminal - Molecular Function: GTP binding (GO:0005525)	104
5	128992	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal Elongation factor Tu C-terminal - Molecular Function: GTP binding (GO:0005525)	75

Preceding Unigenes (1)

Unigene	Build
SGN-U219725	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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