Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U575024 in the current build, Tomato 200607 #2

Unigene SGN-U322438

Unigene Basic Information

Unigene ID:	SGN-U322438
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	322438
mRNA sequence:	Length: 2249 bp

>SGN-U322438 Tomato 200607 #1 (8 members)
GGAGAAGTTCTCATGGCTGACACTGGAGAGAATAGTGCCTTGTTCCCAATTTTTATATTGTCAATAATTGCCCTGCCTTTAGTACCCTAT
ACAATACTTAAATTACTCCGTGTTGCTTCAAAGAAGGAAAAGAGTATTCACTGTGCGTGTTCAGTTTGCTCTCGATCAGGAAAATATCGC
AAATCCATTTTTGGAAGGATCTCTAAGTTTTCAACATGTAGCAACTTTACCTTGCTGTTGCTTTGGGTCATTGTGATTTTCCTTGTTTAT
AGCATCAAGCAAAGTAGTCGTGAGATTGAAGCTTTTGATCCGTTCAGTATTCTTGGGCTAGCACCAGGAGTTACCGAATCTGCAATAAAG
AAAGCATATAGGAGACTTTCAATACAATACCACCCAGACAAAAACCCTGACCCAGCTGCTCATAAGTATTTTGTGGAGTATATTTCCAAA
GCTTACCAGGCCCTGACAGATCCGGTCTCAAGGGAGAATTTTGAGAAATATGGACATCCAGATGGCAGACAGGGTTTTCAAATGGGGATA
GCACTTCCTCAGTTTTTGCTTGATTTTAATGGCTCGTCTGGTGGTATATTATTACTTTGGATTCTTGGAGGTTTTATACTATTGCCAATG
GCTTTTGGTGTTGTTTATCTATCAAGAGCATCAAAGTATGGGGGAAATAATGTCAGGCGTGAAACTCTTGTCACTTATTTTGAATTAGTG
AAGCCCTCCTTGGCTCCAAGCAAAGTTATGGATGTATTCGTTAAGGCAGCTGAGTTCATGGATATTCCAGTTCGAAGAGCTGATGATGAA
CCTCTTCAGGAACTCTTCAAACTTGTGAAAAGTGAACTGAACCTGGATGGTAAGAATGCCAGACAGGAACAAGCAAAATTTTGGAAACAA
CATCCTGCTATTGTCAAGGCCGAATTGTTGATTCAAGCCCATTTACTTCGTAAAGCAGACACTTTCTCTAGTAACTTGCAGCAGGATTAC
AAACATGTGCTGCAGTTTACACCTCGCCTTCTCGAAGGGCTAATCAAGATGGCAACTGTGCCACGCACTGCTAAGGGACATGGTTGGCTA
AGGCCTGCAATTGGAATCGTCGAGCTCTCCCAGTGCATTATTCAGGCCGTTCCCCTTAGTGCTAGGAAGGCAGGTTCAGGATCCTCTGAT
GGTGTTGCTTCGCTTTTACAGCTTCCAAATTTTAATGATGCAGTCATCACAAAGATAGGGAAGAAGGTGCGTACACTACAGAACCTCCTG
GACATGACCCTTCAAGAACGTGCTGAGCTGCTTTCTGATGTTGCTGGCCTATCCGCTGCTGAAGTGCAAGACGTAGAGAAGGTGCTAGAA
TTGATGCCTCGTGCAACAATTGAAGTTACATGCGAGACTGAGGGTGAGGAAGGCATCCAAGAGGGGGACATTGTCACTGTGCAGGCATGG
GTGACAGTCAGACGTGCTAATGGTTTGATCGCTGCTCTTCCACATGCTCCATACTATCCATTCCCCAAGGGAGAGAATTTCTGGTTTTTA
CTTGCAGATGCCAATTCAAATGATGTCTGGTTTTCTGAAAGTATCAACTTTATGGATGAAGCAGCAGCCATAACAACTGCTTCAACAATA
ACCGAAGCGAAAATGGAAGCATCGGGGGCAAATATGGAGGAGATTGCTGCTGCTGTTAAAGATGCTGTTGCGAAAGTTAAGAGAGGGTGC
CGACTGATCTTGGGCAAGATCCAAGCTCCACAGGCAGGAAGTTACAGTCTAAACAGTCATTTGATGTGTGACACATGGATTGGCTGCGAC
ACAAAGACAAACTTAAAACTAAAAGTATTGAAAAGGAGCAGAGCTGGAAGTCGAGGTGGTCATGTGGCTGGGGGAGTGCAGGATGAGAAT
GACGTTGAAGATGAAGACGAAGATGACATTGAAGAGGACGAAGAAGGTGATCAGAGCGAGTATAGCGAGGATGAGGATGAGGACAAGAAT
GAAGACGAGGATGATGAGGTTGACAAACCAAACAATAATTCTAATAGAAAGGGCTTTGCTAATGGCTCCGCTCGAAGAAAGGGTAGAAAG
TAAGTTCCAAAGGCAAATCCGATTTGCATAATGGGGTCTGTATTTTAGTATATCTGTTGAAATAACGCTATTCATTTTCTAGAGTTGGCT
TCTTGGCACTGAATGGATCACAATTTGTGAAGCTAGTTTAAGAGTTTTACCTAACATTTAACATGGTTTGGGCCAATTTTTATTCCCAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (7)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	120373	Heat shock protein DnaJ - Biological Process: protein folding (GO:0006457) - Molecular Function: heat shock protein binding (GO:0031072) - Molecular Function: unfolded protein binding (GO:0051082) Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072) Sec63	9
5	130658	Heat shock protein DnaJ - Biological Process: protein folding (GO:0006457) - Molecular Function: heat shock protein binding (GO:0031072) - Molecular Function: unfolded protein binding (GO:0051082) Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072) Sec63	9

Preceding Unigenes (2)

Unigene	Build
SGN-U222368	Lycopersicon Combined #3
SGN-U236761	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer