Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U584290 in the current build, Tomato 200607 #2

Unigene SGN-U322466

Unigene Basic Information

Unigene ID:	SGN-U322466
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	322466
mRNA sequence:	Length: 1235 bp

>SGN-U322466 Tomato 200607 #1 (8 members)
TTGTGCCTTTATTTTCTCAGTTGGATTTAGGGTCTCCATTTTTAGTAATTTCCATTCTTGGTTTCACCCCCTTTACTTCCCAAAAAAGGC
TAATCATCTGTGACTTCCACCAAAATTTCATCTTTTGGTGTCCGCTTCAAATCATTCTGCTTTCCGTGGATAAGAATCTCTGAGGCTATT
GAATTTATGCTCTGGGAATGCATATGGCTGCATATACAGATTTTTCACCACCATTTGCTATAGTAGAAGGGAGTTACAGTAAGGAGAATA
CATCTGCTGTTAAAGATGAATTACTTGAGGAATCAAATGAAATAAAGACAACAAGTGATAAGCCACTACGAGATCCTTCTGTTGTACAGT
ATTCAGTGAACTCTACTGCACTTGTAGGAGACGCTGATTTAGATTTTGAAATAACTGAGAAGGGTTTCCAACACCCTTCTGAGGGACAAT
CAAACTTTGAACCAATATTTCGTTCTGGAAGTTGTGCTGAGAAAGGACCCAAACAGTACATGGAGGATGAACATATCTGTATAGATGATC
TAATCATACATGTTAATGAAATTGCAGGTTCCACTTCCCCTGCAGCATTTTATGGGGTCTTTGATGGCCATGGGGGTACTGATGCAGCAT
TATTTGTGAGGAATAATATTCTCAAGTTCATAATGGAGGACCCCTGTTTTCCCATGTGTTTAGAGAAGGCACTCAAGAATGCTTTTCTGA
AAGCTGACTATGCTTTTGCCGACGATAGTTCTATTGACATATACTCTGGCACCACAGCATTGACAGCTCTAATGTTTGGAAGAAACATGA
TCGTTGCTAATGCAGGAGATTGTCGTGCTGTGCTAGGGAAACGAGGTAAAGCCATTGAGTTGTCTAAGGACCACAAACCAAATAGCGCAT
CTGAAAGACATCGAATAGAAAAACTTGGAGGAGTCATATATGACGGATACTTAAACGGACAGTTATCTATAGCACGTGCCTTGGGGGATT
GGCACATGAAAGGCCCAAAAGGTTCTGCCTACCCCTTGAGTGCAGAGCCGGAGTTGCAGGAAACATTGTTGACCGAGGATGATGAGTTCC
TAATCATGGGTTGCGATGGTCTATGGGATGTTATGAGCAGCCAATGTGCTGTTACGATGGCCCGGAAAGAACTCATGCTACATAATGACC
CAGAAAGATGTTCAAGAGAACTGGTAAGGGAAGCCCTCAAGCGCAACACATGTGATAACTTAACA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (8)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (8)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101395	Protein phosphatase 2C-like - Molecular Function: catalytic activity (GO:0003824)	322
2	118451	Protein phosphatase 2C-like - Molecular Function: catalytic activity (GO:0003824)	125
5	130001	Protein phosphatase 2C-like - Molecular Function: catalytic activity (GO:0003824)	13

Preceding Unigenes (1)

Unigene	Build
SGN-U219936	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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