Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U564255 in the current build, Tomato 200607 #2

Unigene SGN-U322682

Unigene Basic Information

Unigene ID:	SGN-U322682
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	322682
mRNA sequence:	Length: 1540 bp

>SGN-U322682 Tomato 200607 #1 (5 members)
GGAAGTCATATGAAGTATTTACTCTTACTTAAAACTAAAAATTACAAAATTCCGACAATTATTGTAATAAAAACAGTAAAAAAAAAAGAA
AAAAAAGAAAAGAAAGAGCCACGAAAAGGTTTAATCCTCCGTCTTCACTTTTGTAGACAGCTAATCAGCTGTGCAAAAACTTCGCCTCTC
TCAAGTTGTAAAGGAAAAAAAAATGGGTTGGTTTCCTTGTTCTGGACCATCCAAACAGACCTCAAAGAAGAAAAATTCAGTCGATTCGGG
CCGGCACTCTACTGATAAGTTGAAATCAAAGAATTCATTACGCTCAAAGGAAGTTGATAAGGATGCAGGGTCCAACCAAATTGCAGCCAA
GACTTTTATATTTCGTGATTTAGCAGCTGCAACAAAAAATTTCCGAGGTGATTATCTTCTTGGAGAAGGAGGCTTTGGTAGAGTTTACAA
AGGGGTGATCGAGTCCAATCAGGTCGTCGCCATCAAGCAACTAGATCGTAATGGATTGCAGGGCAACAGGGAATTTCTTGTCGAAGTGCT
GATGTTAAGTCTGTTACACCATCCTAACCTTGTAAATCTAATTGGCTATTGTGCTGATGGAGATCAGAGACTTCTGGTCTACGAATATAT
GCCATTAGGATCATTGGAGGACCATCTTCATGATCCTACGCCAGGTAAGGAACGGCTAGATTGGAACACAAGAATGAAAATTGCTGCCGG
AGCAGCAAAAGGATTGGAATATTTACACAGTGCAAGTCCCCCTGTAATATATCGTGATTTGAAATGCTCCAACATTTTGCTTGGTGAGGG
TTATCATGCGAAGCTCTCTGACTTCGGGTTGGCCAAATTGGGGCCTGTAGGGGATAACACCCATGTTTCTACAAGAGTTATGGGTACTTA
TGGGTACTGTGCACCAGAGTATGCCATGACAGGACAATTGACTTTGAAGTCAGATGTTTACAGCTTTGGGGTAGTCCTCCTGGAGATTAT
TACAGGCAGGAAAGCAATTGAAAGTTCAAAAACTGGAGGAGATTTCAATCTGGTTATATGGGCAAGACCATTGTTCAAAGATCGGAGGAA
GTTCTCACAGATGGCTGATCCAATGCTACAAGGCCATTATCCAGTAAGAGGCATGTACCAAGCTCTAGCAGTTGCAGCAATGTGTGTTCA
GGAGCAACCTAACATGCGTCCAGTCATAGCAGACGTTGTCACGGCTTTGACTTACCTTGCTTCACAAAAGTTTGACCATGAAACCCGAGG
GGGCATCCAAACTTCACGGCCAGGACCTGCTACTTCACCTAGAATGAAACGATGGTGACAAGCTGCAAAAAAGGTTAAAATGGAGCTATG
AACTAGATGGGTGATGGGAACAAAACAAGATCATCAAAAAAGGGGGAGCCAAGACTGGAACCTCTTGAATATCAGCTAAGTTGAAAGTAC
AGATAACAAACCACAATCAGTGGCACCTAGAGTGCAGGTTCAATCACCTGAAGTATATTTGCGCAACAAATATTTTTTCCCTCAGAAATC
AGACCAACTA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118407	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	1853
5	128927	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	615

Preceding Unigenes (2)

Unigene	Build
SGN-U225304	Lycopersicon Combined #3
SGN-U235046	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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