Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U574916 in the current build, Tomato 200607 #2

Unigene SGN-U323897

Unigene Basic Information

Unigene ID:	SGN-U323897
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	323897
mRNA sequence:	Length: 1268 bp

>SGN-U323897 Tomato 200607 #1 (6 members)
CGGCACGAGAGCGCACAAACACAAACACAGCGAGAGTGAAGAAATGGAGGCTGCTAAAAATGCTGGTAAGAGTGTATCGGCGATGGAGGC
ATTTGAGAAGCTGGAGAAGGTTGGGGAGGGTACCTATGGAAAGGTGTACAGAGCGAGAGATAGGATTACTGGCAAGATTGTTGCACTGAA
GAAGACAAGGCTTCATGAGGACGAAGAAGGTGTTCCTCCAACTACTCTCCGTGAGATCTCACTCCTCAGAATGCTCTCAAGGGATCCCCA
CATTGTCAGGCTGATGGATGTTAAACAAGGGCAGAACAAAGAAGGAAAGACTGTTCTTTACTTGGTCTTTGAGTACATGGATACTGATGT
CAAGAAATTTATTCGTACTTTCCGTGCAAAAGGAGAAACTATGCCCCTTAAAATTGTAAAGAGCTTGATGTACCAGCTCTGCAAAGGGGT
TGCTTTCTGCCATGGCCATGGTGTATTGCACAGGGATCTGAAACCACACAATCTTCTGATGGACCGTAAGACGAATGTGCTCAAATTAGC
AGATTTTGGACTTGGCAGAGCTTATACTCTGCCCATTAAGAAGTACACACATGAGATATTAACCCTGTGGTATAGAGCCCCTGAGGTTCT
ACTTGGAGCTACTCATTATTCCACAGCAGTTGACATGTGGTCTGTTGGTTGTATATTTGCTGAACTAGTGACAAACCAAGCCCTCTTCCC
AGGAGACTCTGAGCTGCAACAACTGCTTCACATTTTCAGATTGCTAGGTACTCCTAATGAAGAACTCTGGCCTGGGGTGAGCAAGTTAGT
TAACTGGCATGAATACCCCCAGTGGAAACCACAGCCACTCTCAACCGTTGTCCCTGGTCTTGATGAAGATGGGATTCACCTTCTCAGTGA
GATGTTGCATTATGAGCCGTCTAGGAGGATTTCAGCTAAGAAAGCTATGGAACATCCCTATTTTGATGATCTCGACAAAACTCCTCTCTG
AAAAAAGTCAGCAATTTGATCAACAAAACTCGTCTAACCTCTATCGCAAGCTTTTATTGCTTTTCTCAAGCATCTTTTAATAGTAGTATC
AATTAGTATGATGATGTGTTTCATTTCTAAACCTTTTCTTTTAATATCAACTGGATCAATGTAAGCACAACTATGTGCAATGATATATTT
TGCTATCACATTACTTGGGGTGTTTTGCTGTAAAAAAAAAAAAAGTGCACTGAAGCAACCCAAACGTAGACTGAAGTGCAAGAGGCTAAA
AAGGCATA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
cdkb2	B2-type cyclin dependent kinase

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LB	Leaf Mature leaves	3316	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum lycopersicum	cTSC	seed	2256	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (6)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	128957	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	116

Preceding Unigenes (2)

Unigene	Build
SGN-U225483	Lycopersicon Combined #3
SGN-U237651	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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