Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U563668 in the current build, Tomato 200607 #2

Unigene SGN-U324402

Unigene Basic Information

Unigene ID:	SGN-U324402
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	324402
mRNA sequence:	Length: 1042 bp

>SGN-U324402 Tomato 200607 #1 (5 members)
CAATGCACATGCCGCAGGATCAGAAAATTCTAGCCCTTCTTCTCTTTCAAACTATGGCTATGCTGAACGGGAGCATGTGAAGAAAGAAGA
GACAAAAATAGCCAGTGCAAGAGAAGAAGACGTAGGGGCGTCACTGGAGGATGAGGAAGCAACAGCCGTACAGGAGCAAGTAAGGCAGAT
CAAGGCACAGGAGGAGGAATTCGAAACCTTTGATCTAAAGATTGTGCATAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCA
TGTCGTTTTAAATTCAGTTTTAGCCGGGCGATATCAAGTTACTGAGTATCTTGGATCTGCTGCATTTAGTAAAGCTATCCAAGCTCACGA
TCTTCACACTGGCATGGATGTTTGTGTAAAGATCATAAAGAACAATAAAGATTTCTTTGACCAGAGCCTTGATGAAATAAAGCTTCTCAA
GTATGTCAACAAGCATGATCCCGCTGACAAGTACCATTTACTTCGGTTGTATGATTACTTCTATTATCGAGAACATTTGTTAATTGTATG
TGAGCTCCTTAAAGCAAATCTTTACGAGTTCCATAAATTTAATAGAGAATCTGGAGGAGAAGTCTACTTTACCATGCCAAGACTGCAGTC
AATCACTATACAATGTTTGGAGGCTCTTCAGTTTTTGCATGGCCTTGGGCTTATACATTGTGACTTGAAACCTGAGAACATATTGGTGAA
AAGCTACAGTAGATGTGAAGTGAAGGTGATTGATCTAGGAAGCAGTTGTTTCGAAACCGATCATCTTTGTTCTTATGTCCAATCTAGATC
CTACCGCGCACCTGAAGTTATTTTGGGACTTCCATATGATAAGAAGATCGATATCTGGTCACTTGGCTGCATCCTAGCAGAACTTTGCAC
GGGAAATGTGCTTTTTCAAAATGACTCTCCTGCCACATTACTTGCTAGGGTGATTGGTATTATAGGTCCCATTGACCAAGATTTGCTTGT
TAAAGGACGAGATACTTATAAGTACTTCACCAAAAATCATATGCTGTATGAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
pk6	protein kinase 6	protein kinase

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	119681	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	13
5	130132	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	12

Preceding Unigenes (2)

Unigene	Build
SGN-U230492	Lycopersicon Combined #3
SGN-U242249	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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