Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U571186 in the current build, Tomato 200607 #2

Unigene SGN-U325004

Unigene Basic Information

Unigene ID:	SGN-U325004
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	325004
mRNA sequence:	Length: 2041 bp

>SGN-U325004 Tomato 200607 #1 (5 members)
ACATCTTCTGATCTCTTCATTTAGATTAGTCTAAAGTGAAAAAAAAAAAAGGTGAAAGAAAGAAGAGTTTCCACTAATAGAAAAATAAAA
AATAACTTAATTTGTTAGATCTGTTATTTCATCTACATTTTCTTATTTTAGTGTTACAGTTAGAGCAAACAGAGTTGAAGATGAGGAGCT
TGTGGTGGTCTTTATTGGTAGTACAAATCTTATTCTTATTATTATTGGGTTTTTCCAATGGGGAAAGTCCATATAGATGGTATAATTGGA
ATATTACTTATGGTGATATTTATCCTCTTGGTGTTAAACAACAGGGTATATTGATAAATGGGCAATTTCCAGGACCTCCAATTGATAGTG
TTACTAATGATAACTTGATTATCAATGTTTTCAACAGTTTGGATGAACCTTTTTTGTTGTCATGGAATGGAATTCAACAGAGGAGGAACT
CATGGCAAGATGGAGTATATGGGACTAACTGTCCGATTCCACCAGGCCAAAACTTCACATATGTTCTACAAGTTAAGGATCAGATTGGAA
GTTTCTTTTATTTCCCTTCATTGGCTATGCACAAAGCCGCTGGAGGCTATGGTGGCATTATAATACGTAGTCGTCCACTGATTCCTGTTC
CTTTTCCTCCACCTGCTGGAGATTACACCATTTTGGTTGGTGACTGGTTCAAGCTAAATCACACTGATCTCAAGGCAATTTTAGATGGAG
GAAATGATCTTCCCTTCCCTGATGGTCTTCTTGTGAACGGTCGTGGATCAAATGGTTTAACTTTCACAGTTGATCAAGGTAGGACTTACA
GATTCAGGATTTCCAATGTTGGCCTCACAACAGCTATACATTTTAGAATCCAGGGGCATAAGATGGTCTTAGTTGAAGCGGAAGGGACTC
ACACACTGCAGAATACCTACGAGTCACTTGATATCCATTTGGGTCAGTCCTATTCTGTGTTGGTCACAATGGACCAACCAGGGCAGGACT
ATTACATTGTCGCCTCAACGCGTTCCACTTCACCAGTGCTAACAGCAACATCAATTCTTCACTACAGCAACTCAGCGGGAGGTGTTTCTG
GTCCTCCCCCAGGTGGACCAACAATTGAGATTGATTGGTCTCTCAATCAGGCTCGATCTATTAGGCAAAATTTGACAGCAAGTGGTCCAA
GGCCTAATCCACAAGGTTCTTATCATTATGGGTTGGTTAACACCACGCGGACAATTAGATTGGCAAATTCTGCTCCGATGATTAATGGTA
AAAAGAGGTATGCAGTCAACAGTGTGTCATTCATTCCAGCAGACACACCACTCAAACTAGCAGACTACTTCAAGATTCCAGGGGTATTCA
ACCTTGGTAGCATCCAAGACTACCCCACTGGAGGTGGTGGTTATCTCCAGACCTCTGTCATGGCTGCTGATTTCAGAGCCTACGTTGAAG
TTGTGTCCGAGAATCCAGAAGATACTGTCCAGTCATGGCACATTGATGGCCATATCTTCTTTGTCGTAGGGATGGATGGTGGACAATGGT
CAGCTGCAAGCAGATTAAACTACAACTTAAGAGATGGTATTTCGCGTTGTACAATTCAGGTATATCCAAGATCATGGACAGCTTTATACA
TGCCATTAGACAATGTGGGAATGTGGAACATTAGATCAGAGAATTGGGCTCGGCAGTACTTAGGCCAGCAGTTCTACCTTCGCGTTTATT
CACCTGTCAATTCATGGAGAGATGAGTATCCAATTCCAATTGGTGCTCTTCTCTGTGGACGTGCATCTGGACGCAAGACTCGCCCACTCT
AAGGAACGAATTACATCAGCTTAACCAGTCACGAAAGGGTGACTGATCGATCTTCAAAGAGTTATGGCAAACAATTTTAAAGGGGAAGTA
GCAGAAAACTGCTCTTACTCTGATCAGCATTTCTCTTTTTTTTGTTTATCATTTCATTTTAGGATTACTTATGAGATTATTGGTTGCAGC
GTGAGAAGAAAAGTAATATCTATTCATTTTATAAAACTCAATTCAGAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101438	Multicopper oxidase type 3 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Multicopper oxidase type 2 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Cupredoxin Multicopper oxidase type 1 - Molecular Function: copper ion binding (GO:0005507)	162
2	118466	Multicopper oxidase type 1 - Molecular Function: copper ion binding (GO:0005507) Multicopper oxidase type 2 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Multicopper oxidase type 3 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Cupredoxin	111
5	128966	Multicopper oxidase type 1 - Molecular Function: copper ion binding (GO:0005507) Multicopper oxidase type 2 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Multicopper oxidase type 3 - Molecular Function: copper ion binding (GO:0005507) - Molecular Function: oxidoreductase activity (GO:0016491) Cupredoxin	105

Preceding Unigenes (1)

Unigene	Build
SGN-U224000	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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Start Date:
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