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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U563994 in the current build, Tomato 200607 #2

Unigene SGN-U325146

Unigene Basic Information

Unigene ID:	SGN-U325146
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	325146
mRNA sequence:	Length: 1053 bp

>SGN-U325146 Tomato 200607 #1 (5 members)
GCCATGGAGAAAATCGAGAAGAACTCGATTGGTGGAAGAAGTGAGATTCTTAAGGGTTATCTTATGGCTACTCTGTTTTATGAACCTTCA
ACTAGAACTAGGCTTTCATTTGAATCTTCTATGAAGCGTTTAGGAGGAGAAGTACTAACAACTGAAAATGCTCGTGAATTTTCGTCTGCG
GCGAAAGGTGAAACACTAGAAGATACAATTAGAACTGTTGAAGGTTACTCTGATATCATTGTTATGAGGCATTTCGAAAGTGGTGCTGCT
CGACGAGCTGCATTGACTGCATCTATTCCGATTATAAATGCAGGAGATGGTCCGGGACAACACCCGACTCAGGCTCTTCTAGATGTGTAT
ACGATTGGACGAGAAATAGGGAAACTCGATGGTATAAACATTGCTCTTGTTGGTGATTTAGCATACGGGAGGACAGTTCGTTCACTTGCT
CATTTGCTTGCGCTGTATAAAGATGTGAAGATTTACTTTGTATCCCCTGATGTTGTTAAAATGAAGGATGACATAAAGGATTACTTGACA
TCAATGGGGGTTCGATGGGAGGAAAGTGCTGATTTGATCGAGGTGGCTTCTAAATGTGACGTGGTGTATCAAACTCGGATTCAACGAGAG
AGATTTGGAGAGAGGGTTGATTTGTATGAAGAAGCTCGAGGTAAGTATATCGTTGATATGAGTGTCGTAAATGCTATGCAGAAACATGCT
GTAGTGATGCATCCTTTGCCAAGACTTGATGAGATAACGGTTGATGTCGATGGTGATCCGAGGGCTGCTTATTTCAGACAAGCTAAGAAT
GGTCTCTACATTCGGATGGCGCTTTTGAAGCTTCTACTCCTTGGTTGGTGAAAGACGCGAACTTTTTATGTGGCGAAATCGTGCTGCTTG
TTGTCTGGATTCTGCTGTTGTTGAATTCTAGATTTAGTTAAACTTGTTTTAGCATAAAAGAAAATTGAATCTCTTTCTTTGTTCACAAAA
TAGTACATTCTATATATGCAATTTGAAAACTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
X74072	aspatate carbamoyltransferase	aspatate carbamoyltransferase

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 8 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101375	Chaperonin Cpn10 - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein folding (GO:0006457) GroES-like	508
2	122458	Aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain - Biological Process: amino acid metabolism (GO:0006520) - Molecular Function: carboxyl- and carbamoyltransferase activity (GO:0016743) Aspartate/ornithine carbamoyltransferase - Biological Process: amino acid metabolism (GO:0006520) - Molecular Function: amino acid binding (GO:0016597) - Molecular Function: carboxyl- and carbamoyltransferase activity (GO:0016743) Aspartate/ornithine carbamoyltransferase Asp/Orn-binding region - Biological Process: amino acid metabolism (GO:0006520) - Molecular Function: amino acid binding (GO:0016597) - Molecular Function: carboxyl- and carbamoyltransferase activity (GO:0016743) Aspartate carbamoyltransferase - Molecular Function: aspartate carbamoyltransferase activity (GO:0004070) - Biological Process: 'de novo' pyrimidine base biosynthesis (GO:0006207)	5
5	132652	Aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain - Biological Process: amino acid metabolism (GO:0006520) - Molecular Function: carboxyl- and carbamoyltransferase activity (GO:0016743) Aspartate/ornithine carbamoyltransferase - Biological Process: amino acid metabolism (GO:0006520) - Molecular Function: amino acid binding (GO:0016597) - Molecular Function: carboxyl- and carbamoyltransferase activity (GO:0016743) Aspartate/ornithine carbamoyltransferase Asp/Orn-binding region - Biological Process: amino acid metabolism (GO:0006520) - Molecular Function: amino acid binding (GO:0016597) - Molecular Function: carboxyl- and carbamoyltransferase activity (GO:0016743) Aspartate carbamoyltransferase - Molecular Function: aspartate carbamoyltransferase activity (GO:0004070) - Biological Process: 'de novo' pyrimidine base biosynthesis (GO:0006207)	5

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (1)

Unigene	Build
SGN-U226222	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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