Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U563244 in the current build, Tomato 200607 #2

Unigene SGN-U325170

Unigene Basic Information

Unigene ID:	SGN-U325170
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	325170
mRNA sequence:	Length: 1619 bp

>SGN-U325170 Tomato 200607 #1 (5 members)
TCTATAGGTGAATTTGCAAAGTTGAATGATGGAGCCATTGATGAAGATATGGAGCTTTGATCTTGTGGCATGGAGGGGTTTCTTGTTTTC
AGCATTGATACTTAACTTTATATTCGCTTGCCAACTCTTTTTCCTTCAACCCCTTGTATCTGCTTTAGACGCCAAACCTGGTGATGCTGC
TGCATTGTTTGAGAGAGTTGCACAAAATGTAAAAGTTAAGAAATACAGTGAGGCACTTAATGATCTAAATTCAGCCATAGAGGCAGACCC
AACACTTTCAGAGGCGTATTGGCACCGTGCATCTCTCCTTCGTCAGTTGTGCAGATATGAGGAATCGGAAAAAAGCTACAAAAAGTTTCT
GGAGATGAAACCAAGAGACTCAGCTGCAGAGAAGGAGCTTTCTCAGATGCACCAAGCTAAGAGTGCTCTTGATTCAGCTACCAACCTGTT
GGACACGGATGACATTAAAAAAGCGTTGGAGTATATTGATAAAGTCGTACTAGTTTTCTCTCCAGCATGCTCCAAGGCCAAACTCCTTAA
GGTGAAGCTATTGCTAGCAGATAAAGATTATTCAGGTGTCATATCCGAGGCAGGATTTATACTTAAAGAGGATGAGGATAATCTGGAGGC
TTTACTTCTACGAGGCCGTGCCTACTACTATCTGGCTGATCATGATGTATCCTTACGGCACTACCAAAAAGGTCTTCGTTCAGACCCAGA
GCACGGGGAATTGAAGAAAGCCTATTTTGGCTTGAAAAACTTACTTAAAAAAACTAAAAGCGCAGACGATAACGTAAGTAAGGGTAAATT
TCGTCTTGCTGTGGAGGAGTACAAAGCAGCCCTGGCGTTGGACCCCAACCATTCTGCACATAATGTAAATCTTCATCTTGGTTTGTGCAA
AGTCTTGGTAAAGCTTGGAAGGGGGAAGGATGCTATATCAAGCTGTTCAGAAGCCCTTGAACTTGATGGAGAGCTTATCGATGCTCTAGT
GCAGAGGGGTGAAGCCAAGCTTCTAACAGAAGATTGGGAGGGAGCTGTTGCAGATTTGAAAGAAGCAGCTGAAAAATCTCCTCAGGATAG
GAATATTCGTGAAGTGCTGATGAGGGCTGAGAGATCATTAAAATTAAGTAAACGGAAGGATTGGTATAAGATATTGGGAGTGTCAAAGAC
ATCATCTGTATCAGAGATAAAAAAGGCATACAAAAAGCTTGCGCTGCAATGGCACCCTGACAAGAACGTTGACAACAGAGAAGAAGCTGA
AGAAAAGTTTCGTGAAATAGCAGCTGCATATGAGGTTCTCGGGGATGAGGAAAAACGTACACGATATGACCAAGGGGAAGACATTGAAGA
CATGGGTTCAGGGATGGGTGGTGGAGGATTCAACCCATTCGGTGGAGGATTTGGTGGAGGATTTGGCGGAGGAGGGCAGCAGTACACATT
CCACTTTGAAGGAGGATTTCCAGGTGGAGGCGGGGGAGGGGGATTTGGCGGATTTCATTTTTGACCTCCATGGCGTTCGTTTATACTCCT
CTCATGGTTGCTGCATAGCATAAAGTACAGTAGGCTCTTCTTATACTCTGATTTCCCAGAAATTTTTGCTTTGCAGATACCATTTTTAT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
P58IPK	P58IPK

Genomic locations (0)

None

Library representation (5)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	t3_tus	Rearrayed collection of L. esculentum cDNA clones	1883	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101369	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	604
2	118427	Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072)	212
5	135296	Tetratricopeptide TPR_1 Tetratricopeptide TPR_2 Protein prenyltransferase Heat shock protein DnaJ N-terminal - Molecular Function: heat shock protein binding (GO:0031072) Tetratricopeptide-like helical - Molecular Function: binding (GO:0005488) Tetratricopeptide region	3

Preceding Unigenes (2)

Unigene	Build
SGN-U228453	Lycopersicon Combined #3
SGN-U241147	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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