Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U577482 in the current build, Tomato 200607 #2

Unigene SGN-U325519

Unigene Basic Information

Unigene ID:	SGN-U325519
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	325519
mRNA sequence:	Length: 1305 bp

>SGN-U325519 Tomato 200607 #1 (5 members)
GTTATTTGGGCGGTCCGTTTCACTTTTCAAATTCTAAAATCTCCACTTCCCCTTTCAAACCCTAGTGGATCAAAATTATGAAGACGGCGA
AGCCATTGAAGCAGCTTAAGCTCTCTGTACCTGCTCAAGATACTCCCATTTCCAGCTTTTTGACTGCGAGTGGAACGTTTCATGATGGCG
ATTTACTTTTGAACCAGAAAGGACTCAGACTCATTTCTGAAGAGAATGAATCTCTGCCCTCAGAAACTAAGGAGATAGATCTTCAGTTTT
CATTGGAAGATCTTGAAACCATCAAAGTCATTGGAAAAGGAAGTGGGGGTGTTGTTCAACTTGTTCGTCATAAATGGGTTGGAACATTGT
TTGCTCTGAAGGTTATCCAGATGAATATACAAGAAGATATTCGTAAGCAGATAGTGCAAGAACTGAAAATAAATCAAGCATCACAATGTC
CACATGTTGTTGTATGCTACCACTCTTTCTATCACAATGGAGCTATATCTCTGGTTTTGGAGTATATGGACCGTGGATCTTTAGTTGATG
TAATCGGGCAACTTAAGACCATTCTTGAACCATATCTCGCAGTTGTTTGCAAGCAGGTTTTACAAGGTCTTGTCTACTTGCATCACGAGA
GACATGTTATCCACAGAGACATAAAGCCATCAAACTTGCTAGTGAACCACAAAGGAGAGGTAAAAATTACAGATTTTGGTGTAAGTGCAA
TGCTAGCCAGCTCTATGGGTCAGAGGGATACATTTGTTGGAACCTACAATTATATGGCACCTGAAAGAATAAGTGGAAGTACCTATGACT
ACAAGAGTGATATCTGGAGCTTGGGCATGGTCATCCTTGAATGTGCTATTGGACGTTTCCCATACATACAGTCAGAGGACCAGCAAGCTC
GGCCTAGCTTTTACGAGCTTTTGGATGCTATTGTTAGCAGTCCACCACCTTCTGCTCCAGTAGATCAATTTTCCCCAGAATTCTGTTCAT
TTGTTTCTGCTTGCATTCAAAAGGATCCCAGGGATAGATCTTCAGCTCTGGACCTTTTGAGTCACCCTTTTGTTAAGAAGTTTGAAGACA
AAGACATTGATCTCAGCATACTTGTCAGTAGCCTGGAACCCCCAGTAAATTTTCCAAGATAAGTCGTTGTCATATATATATTAGTACAAC
TACTATTACATTGTAGACCTGTAATATCTAGCAGTTTCTGTATGTAAACATCACTTGAGATGAATGAATTACTTAGCAGCATTTTTATCT
AATATGAGTTCAATATACTAGTGATTTGTCTCCTCCAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
SlMAPKK3	MAP kinase kinase 3	Mitogen-activated protein kinase

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 6 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	130517	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	10

Preceding Unigenes (2)

Unigene	Build
SGN-U229108	Lycopersicon Combined #3
SGN-U230752	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

SGN is supported by , and hosted at
Cite SGN using | Disclaimer