Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U564548 in the current build, Tomato 200607 #2

Unigene SGN-U325678

Unigene Basic Information

Unigene ID:	SGN-U325678
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	325678
mRNA sequence:	Length: 1428 bp

>SGN-U325678 Tomato 200607 #1 (5 members)
AAAGAGAATCTAGAGAGAGAAAACAGAAACCCATTTCCCAGAAAGAACACAAAAATAGAAATGGCAACTTCAACCCAGTTCCCGGACGAT
TTTCGGTGCCCGATTTCCCTTGAAATTATGTCCGACCCGGTTATTCTGTCGTCGGGTCACACCTTCGACCGCTCTTCAATCCAACGGTGG
GTAGACTCCGGCCACCGGACTTGCCCGATTACCAAGCTACCCATTTCCGACCCGGTTTCTCTCATCCCTAATCATGCCCTTCGGAGTCTC
ATTTCCAATTATACCCTCGTCTCTTTCCCCAAACCACTCACATACCCTGAACCGCAGTCCCTTATTCAAACCCTTATTGCTTCTTCTTCT
TCTAATTTGGATTCTAAGCTCCACTCGCTTGACCAACTCAGTAAGCTTTCCAAGCGTGATTTGGCGATCCGAAGGAAACTCACCGAGTCG
GGCGCTGTATCTGCTCTTCTCAATTGCGTTAACTCGGATGATGACTCGGGTGGTTTGCAGGAGAAAGCGCTTCATTTGTTGTTGAATTTG
AGCTTGGATGATGATAACAAAGTGGGGTTGGTGGCAGAAGGGGTTGTGGGGAAAGTGGTCTCCTCTTTACGAAGAGGTGCTGGAAACTCG
AGGGCGGTGGCGGCCACGGTTTTGACGAGTTTAGCGGTGGTGGAAGTGAATAAGGCAACCATTGGGGCATACCCAGATGCAATTCCAGGG
TTAATTTCGCTGCTTTGGGGTGGCAGCGGTAGAGAGAGAAAGGAAGCTGCTACTGCTCTCTACACGCTGTGCTCTTTCCCGGATAATCGG
GTTCGGGCCGTGCAGAACCAGGCTGTTCCAGTACTAATTAAGAATGCTAATTTAGGCCTAGAAAGATCAGTTGAGGTATTGGGATTATTA
GCAAAATGTAAAGAGGGTCGTTATGAAATGTTTAAATACTGTGGGTTGTTGGATATTTTGATAAAATTCTTGAAAAATGGGTCTTCAAGA
GCTGTGCAATATGGTCTTTTGACTATCAGCTTGCTGTGTAGTTACAGTGAAAGGATGCGTGTGTTGGCTGTAAGAGAAGGGGTGTTTGAG
ATTTCTGTTGGGTTATTACAAGATGATAATGAGAAAGTGAGAAGAAATGCTAATAGCTTGATTCAGGTTTTACAAGGGCAAACATTAAGT
CTTTGAGATATGAATTTGGAAAGTGTTGATTTTGAATGGATTATTGGAAGCTTTGGAGGGTGAAGAAGAAGAAGGTGAGTTTTTAGGCTT
CCTCATAATTATTTTTGTTGAATAGTTTTTCTTTGTACAAAAAGATTAGAATTTTAGGGCAANAAAATGTGCATCTCTCTTTTTCTCTAT
CAAAATCTCTTTTGTTTTTTTGGTTTTATATTATCAACATAAGAATAAGAATGAAAAGACAAACATCAAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1

mRNA member sequences (5)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101373	Armadillo-like helical - Molecular Function: binding (GO:0005488)	564
2	118456	Armadillo-like helical - Molecular Function: binding (GO:0005488)	120
5	129030	U box - Cellular Component: ubiquitin ligase complex (GO:0000151) - Molecular Function: ubiquitin-protein ligase activity (GO:0004842) - Biological Process: protein ubiquitination (GO:0016567)	58

Preceding Unigenes (1)

Unigene	Build
SGN-U223532	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
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