Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U583290 in the current build, Tomato 200607 #2

Unigene SGN-U327364

Unigene Basic Information

Unigene ID:	SGN-U327364
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	327364
mRNA sequence:	Length: 1744 bp

>SGN-U327364 Tomato 200607 #1 (4 members)
AATCGATCAGATTTCTCCGTTGCTCAATTTCCCGGCGATTTCTCCACCGGAATTTCTCCATTTCCGGTTTTTGATGAGCTATAGTTGAAG
GTTGCTTTGCTTTTGGTGATCTGTGGGAAATGAGTGTTCAGTGATGAAGAAAGTGAAGAGAAAGCTTGGGAAGTATGAAGTTGGCAGAAC
TATTGGTGAAGGGACATTTGCCAAGGTTAAGTTTGCACGAAACACCGAGACTGGAGAGAATGTTGCCATTAAAGTCTTGGCCAAAAGTAC
CATTCTTAAGCATAGAATGGTTGAACTGATCAAAAGAGAGATATCTATAATGAAGATTGTCAGACATCCTTGCATAGTTCGACTTCATGA
GGTTTTAGCTAGCCAGACAAAAATATATATCGTTCAGGAGTTTGTCACTGGAGGAGAGCTTTTTGATAAAATTGTTCATCTAGGTAGGCT
TTCTGAGGATGAAGCAAGGAGATACTTCCAAGAACTCATAGATGCAATTGCTCACTGTCACAGCAAGGGTGTTTACCACAGAGATTTGAA
GCCTGAAAATTTGCTTCTTGATTTCCAAGGGAACTTAAAAATTTCTGACTTTGGGCTTAGTGCATTGCCTCAACAAGGAGTCGAGCTCCT
CTATACCACTTGTGGGACTCCAAATTATGTTGCACCTGAGGTGTTAGGTAACCGAGGTTATGATGGTGCTGCTGCGGATGTGTGGTCATG
TGGTATCATCCTTTATGTTCTGATGGCAGGATATCTTCCATTTGATGAGACAGACCTTCCTACCTTGTATACAAAGATCAAGGCTGCTGA
ATTTTCCTGTCCATTTTGGTTTTCTCCTGGTGCAACATCGTTGATTCAAAAAATCATTGATCCAAATCCTCAAACTAGGATCAAGATTGA
TGGAATAAAACGAGACCCTTGGTTCCGGAAAAACTACAGAGCTGTTAAAGCTAAAGCAGATGAAGTAGTGAATCTTGATGATATCCATGC
TGTGTTCGACGACATTGAGGATGCATTTGTCAGTGAAAAATCAGAAGATAGTGAGAGTGGTCCCTTGGTAATGAATGCATTTGAGATGAT
AACACTATCTCAGGGATTAAATCTATCCGCTTTGTTTGACAGACGTCAGGATTATGTCAAGCGTCAAACTCGATTTATTTCCCGCCAACC
TGCTAAAGTCGTCATTGAAACTATTGAAGCAGCTGCAGAGTCGTTGGGTCTTAAGGTCCACACACGCGATTACAAGACAAGAATTGAGGG
GGTAACGGCAAATAGGGCTGGTCAATTTGCTGTTGTGCTGGAGGTTTTCCAAGTAGCCCCTTCCCTTTTTATGGTTGATGTTAGAAAGGC
TGCTGGGGACACTCTTGAATATCACAAGTTCTACAAAACCTTCTGCACGAAAATTGACGACGTCATTTGGAAACCGAAGGAAGGCATGTC
AAATGCTGTTCTGCTTAGGACAAGGACTCGCTGAACCAGATTTCTGGGAATGAAGTGAATCACTTATCAATTTGATGTGCTCCGAAGACG
TTCGTTGTGTTAGGTATAGTGTGTGTAACTGCATGTTGTTAATCTTTTGTTCACTACATATCTTAAGTGATAAATCATGGGCTCAAAAGC
AATACAAGTAGGGTTGTAAATGAGACGGTTCGATCAGTTGTAACCAATTTTTCGGATATTATATAATGTATAACCAAAACCTAGACTTTT
CAAAACCATCCCAATAATATCGGTTTCTCTTTGG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
cipk	calcineurin B-like interacting protein kinase

Genomic locations (0)

None

Library representation (4)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	LC	Leaf Mature leaves	5712	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (4)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 7 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118408	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	587
5	128941	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	167

Preceding Unigenes (1)

Unigene	Build
SGN-U228360	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Description:
Event Web URL:

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