Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U594480 in the current build, Tomato 200607 #2

Unigene SGN-U336085

Unigene Basic Information

Unigene ID:	SGN-U336085
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	336085
mRNA sequence:	Length: 1425 bp

>SGN-U336085 Tomato 200607 #1 (1 members)
TGTTCTATCCTCCTCTTCTCCAAGTTAAGTTGGTTGCAAAAGCAAATGAGAAGCTTTGGAAATTTGGGCAATGGCCTCTACTTGCATTTG
CTTTGGCAATTTGCTTTGTAGCCAGCACTGTTGTTGCTGACTACTCTTATGACTATACTTCTCATTCACCTTCTTACAACTCTAAGAAAG
ACCACGAATCACCTTCACCATACTACAAGAAACCGGAAAAACATGTTCCATCACATTACTATTACAAGTCACATGCTCCTTCAAAACACT
ACTATAAGGCACCTATTGTTGCAAAGTATTACAAGTCACATGCTCCTTCAAAGCACTACTACAAGGCACCTATTGTTACGAAGTATTACA
GGTCGCATGCTCCTTCAAAGCACTACTACAAGGCACCCGTTGTGGCAAAGTATTACAAGTCACCTGCTCCTTCGAAACAATACTACAAGG
CACCGGTGGTAGTGAAGTATTACAAGTCACCAGCTCCTTCAAAGAATTACTACAAGGCACCAACTCCTTCAAAGTACTACTACAAATCGC
CAGCTCCTTCAAAGTACTACTACAAGTCGCCATCACCTGCAAAGTACTACAAGTCGCCTGCTCCATCAAAGTACTACTACAAGTCGCCAT
CACCTCGAAAGTACTACAAGTCGCCTGCTCCATCAAAGCACTATTACTACAAGTCCCCGTCCCCTTCAAAATATTACAAATCACCCGCTC
CTTATAAATACTATAAATCACCAGCACCACAAAAATATTACAAGTCGCCTGTTTACTACAAGTCTCCTCCACCACCAACAACTTATTACG
AGAAATCACCTTCTTACTACAAATCCCCTCCCCCTCCACCATACTACAAAGAATCCACCCCTTACTACAAATCCCCTCCACCTTCCCCAT
ACTACAAAGAATCTTATAAATCTCCTCCCCCTCCACCATACTATGAAGAATTTACGCCTTCCTACAAGTCCCCTCCACCTCCACCATATT
ACAAAGAATCTACGCCTTCCTATAAATCTCCTCCACCCCCACCAAAGCACTATGATCAATCTCCTACATCCTATAACTCACCACCTCCAC
CACCACCAGCCTATTACAAGCAAACTCCCACCTATGCCTCACCTCCACCACCTCAGAAGTACGAGCAGTCTGTCACCTATGCTTCACCTC
CACCCCCATCGACGAACTACTAGACATTCAATAACTCTTATCATTTCCATGACTTCTACATCCTATTTTGATTTCATTCCCTCTTCCAAA
ATTTAATGTATGCTTGTCAAAAATGATCAGCTTTGCTTACTGTATGTTCAATATTGTATTTTGTATTATGTCTTCATTAGTTTTTCTCAT
TGTATCAAGAGTAATAGTTTGTTACCTATCTTCTCTTTCTTTGTGTAATATTATGTGGTTTTAATCAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
dif10	extensin-like 10

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E744880
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 1 | go: 3 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101360	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	4049
2	118412	Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor	351
5	129118	Extensin-like region - Molecular Function: structural constituent of cell wall (GO:0005199) - Biological Process: cell wall organization and biogenesis (sensu Magnoliophyta) (GO:0009664) - Cellular Component: cell surface (sensu Magnoliophyta) (GO:0009928)	39

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
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