Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U563240 in the current build, Tomato 200607 #2

Unigene SGN-U336302

Unigene Basic Information

Unigene ID:	SGN-U336302
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	336302
mRNA sequence:	Length: 524 bp

>SGN-U336302 Tomato 200607 #1 (1 members)
TCCAGATGCCAATTCAAAACCAGAGGATTTGTGGAGAAATCATTCAAAAGTTGTTCAGCCAAAGCCTCACAGGAAGGACAGCCCATCTTG
GAAAGCAATACAAAAGATCTTGGAGAGTGGAGAACCGATAGGCTTGAAACATTTCAAGCCAATTAAACCACTGGGATCGGGCGACACTGG
CAGTGTGCATTTAGTGGAGCTTTGCGGAACAGACCAGCACTTTGCAATGAAAGCAATGGATAAGAGTATAATGCTTAACCGAAACAAGGT
GCATAGAGCTTGTGCAGAACGAGAAATCCTAGATATGTTGGACCACCCTTTTCTTCCCGCACTTTATGCATCTTTTCAGACCAAAACCCA
TATCTGTCTAATAACTGATTACTACCCTGGTGGAGAGCTGTTCATGCTTCTAGATAGACAACAAACAAAGGTGTTGAAGGAAGATGCTGC
ACGGTTCTATGCCGCTGAAGTTGTAGTCCGCCTTGGGGGNAAAAGGGGGGTTACCTTCACTGTCAAGGTATAAT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
phot1	phototropin 1	phototropin

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E207321
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 1 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118461	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	115
5	128997	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	72

Preceding Unigenes (1)

Unigene	Build
SGN-U216278	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL:

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