Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U588253 in the current build, Tomato 200607 #2

Unigene SGN-U343870

Unigene Basic Information

Unigene ID:	SGN-U343870
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	343870
mRNA sequence:	Length: 1353 bp

>SGN-U343870 Tomato 200607 #1 (1 members)
TTTTTACTAATTAATTATTATAATCATAGAAAGAAAGGATATTCATACATGGGGCATCATTCATGTTGTAATCAACAAAAGGTAAAGAGA
GGACTTTGGTCACCAGAAGAAGATGAAAAGCTCATAAGATATATTACTTCTCATGGCTATGGCTGTTGGAGTGAAGTCCCTGAAAAAGCT
GGGCTTCAAAGATGTGGAAAAAGTTGTCGTTTGAGATGGATCAATTATTTGAGGCCTGATATTAGAAGAGGAAGATTTACCCCAGAAGAA
GAAAAGTTGATTATAAGTCTACATGGAGCTGTAGGCAACAGGTGGGCACATATAGCGAGTCATTTACCTGGAAGAACCGATAACGAAATA
AAAAATTACTGGAATTCTTGGATAAAAAAGAAGCTAAAAAAAACTTCAAAGTCATCAACAAACACAACTTCAATTACTGATCATCATCAC
CACCAACATCAAAATCAAAGACCTCAATTGACAAATTATAACACAATTACAAGCCAACAAGATATATTCTTCACACAAGACATTGGAACA
AAATCTCAAGTACTCCTCCAAGATTCTACCCTATTCAATTCACCAAACCAATTGTTCTTTTTTGATGGTGGTTCACTTGACTCAATGACA
AATGTTCTTATTAACGATGCCACAAATCGAAATGCTACTAATAACACCTCGTTATTTCAAGAAACATCGATATTAAATTCAGAGTTCTGC
TGGCAAGTAGATCAACAACAAGTACAGACATCTTCTTACGCGATAGGGATGAATTCAAATTATTTGCCACCTTTGATAGAGAGTATGGTA
CCACCAATGGAAATACCTAGTAGTAATAATAACAATAATATAATATTGGAAGGACAAGAAAATAATAATGAATTGAATGAATGGAATAGT
CAAGTTGACACACAACAATGTTGTCCAAGTTATCTATTTTGGGATCAAGAAAATGGATCAATTGGTGGTGATCATGAGATTATAGATCCA
ACTACATCAAACAATATGGGACAAATTTTATCTTCTTTTCCTTCTACTTTATGAGATGATTGAAGATTGATTATTTTTTTTCGAATTATT
TCGGGAGTTTTTATTTTATTTTATTAATTGAGTTGTGAAATAGATTAGAGAGTGAAATGAAAGCATGTTAATTAATTAAAAGTGTTTCTT
TGGACATATTTTTAAAATTAAGTGAGAGGGGAAATAACATTGAGTTTTTATCTATGAGAAATGTTTCACTTATTCTTTAATTCACCAATC
AGTATCAGAGTTTAAGTTATATATATTTACCGATGTTAGTGTAAGAAAAATTTACATGTATCCATTGTAATAGATAATTTGATTTATTTT
CAC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
thm1	LETHM1	R2R3MYB transcription factor

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E744632
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101400	Homeodomain-like	294
2	118421	Myb DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Homeodomain-like	250
5	128932	Myb DNA-binding - Molecular Function: DNA binding (GO:0003677) - Cellular Component: nucleus (GO:0005634) Homeodomain-like	238

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
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Event Description:
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