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This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U599152 in the current build, Tomato 200607 #2

Unigene SGN-U345469

Unigene Basic Information

Unigene ID:	SGN-U345469
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	345469
mRNA sequence:	Length: 105 bp

>SGN-U345469 Tomato 200607 #1 (1 members)
GCACTTTTTGTTAACACTCTAAAAAGTTACATACAGTCTTGACCCTTTTGGGCAAACCTAACCCCCCCAGCAACTTTTAACTGGCGGGGA
AACTATGCATCCACC

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E220781
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	No significant hits ( or none blast was used over this dataset )

swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P147547 (103 Aa)

AACVTHYNLEVGYGDSLDSGASLRLCCHHDPSFVSTKINFKLKKFGCKGTDTQDLIGYDQTIGHDIEYEPVEGQDYNFPEGCPCMMNCVM
MTTTNYAKKLGVH

SignalP predicts non-secretion with a score of 0.045

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P275187 (46 Aa)

PPQQLLTGGETMHPPQRVQIHDKKLLIVQRPRKKKGCRPTLNKSAH

SignalP predicts non-secretion with a score of 0.02

No InterPro domain matches or not analyzed.

Gene Family (1)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101749	Clathrin adaptor complex small chain - Biological Process: intracellular protein transport (GO:0006886) - Cellular Component: clathrin vesicle coat (GO:0030125) Longin-like - Biological Process: transport (GO:0006810)	41

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (1)

Unigene	Build
SGN-U238126	Lycopersicon Combined #3

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